Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 8947 and 8948 are separated by 201 nucleotides8948 and 8949 are separated by 430 nucleotides8949 and 8950 are separated by 116 nucleotides8950 and 8951 are separated by 100 nucleotides mRNA_579: 8947 - K10686 UBE1C, UBA3 ubiquitin-activating enzyme E1 C, at 1,386,772 to 1,388,532 8947 mRNA_580: 8948 - Hypothetical Protein, at 1,388,734 to 1,389,540 8948 mRNA_581: 8949 - Interpro ERCC4 domain 0, at 1,389,971 to 1,392,481 8949 mRNA_582: 8950 - K02876 RP-L15, MRPL15, rplO large subunit ribosomal protein L15, at 1,392,598 to 1,393,775 8950 mRNA_583: 8951 - HMMPfam-Protein of Unknown function (DUF1690)-PF07956, at 1,393,876 to 1,394,660 8951
Group Condition mRNA_579 mRNA_580 mRNA_581 mRNA_582 mRNA_583
8947 8948 8949 8950 8951
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. -0.1 -0.7 N.D. +0.1
facs on lipid accumulation Sorted High BODIPY Gate N.D. +0.1 -0.3 N.D. -0.5
facs on lipid accumulation Sorted No BODIPY Gate N.D. -0.1 -0.5 N.D. -0.1
growth on oleic acid YNB Glucose N.D. -0.3 -0.3 N.D. -0.1
facs on lipid accumulation Sorted Low BODIPY Gate N.D. +0.1 -0.7 N.D. -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. -0.2 -0.6 N.D. +0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. -0.3 -0.4 N.D. +0.2
growth on oleic acid YNB Oleic Acid N.D. -0.1 -0.2 N.D. -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. -0.2 -0.3 N.D. +0.2
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -0.1 +0.2 N.D. -0.4
growth on ypd YPD N.D. -0.2 +0.3 N.D. -0.2
ypd buoyancy 40 hrs High Buoyancy N.D. +0.1 -0.2 N.D. +0.1
auxotrophy YNB Glucose 75mM Arginine N.D. +0.0 +0.2 N.D. -0.2
growth on ricinoleic acid YNB Glucose N.D. +0.1 +0.1 N.D. -0.1
ypd buoyancy 40 hrs Median Buoyancy N.D. -0.0 +0.2 N.D. -0.0
growth on ricinoleic acid YNB Ricinoleic Acid N.D. +0.3 +0.2 N.D. -0.4
ypd buoyancy 40 hrs Low Buoyancy N.D. +0.1 +0.2 N.D. -0.1
auxotrophy YNB Glucose N.D. +0.1 +0.1 N.D. -0.0
auxotrophy Dropout Complete N.D. +0.0 +0.5 N.D. -0.2
auxotrophy YNB Glucose 75mM Methionine N.D. +0.1 +0.4 N.D. +0.2
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -0.3 +1.0 N.D. +0.5
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