Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 8950 and 8951 are separated by 100 nucleotides8951 and 8952 are separated by 145 nucleotides8952 and 8953 are separated by 314 nucleotides8953 and 8954 are separated by 164 nucleotides mRNA_582: 8950 - K02876 RP-L15, MRPL15, rplO large subunit ribosomal protein L15, at 1,392,598 to 1,393,775 8950 mRNA_583: 8951 - HMMPfam-Protein of Unknown function (DUF1690)-PF07956, at 1,393,876 to 1,394,660 8951 mRNA_584: 8952 - K01259 pip proline iminopeptidase, at 1,394,806 to 1,396,431 8952 mRNA_585: 8953 - HMMPfam-Polynucleotide kinase 3 phosphatase-PF08645,HMMPfam-AAA domain-PF13671,SUPERFAMILY--SSF52540,SUPERFAMILY--SSF56784, at 1,396,746 to 1,398,490 8953 mRNA_586: 8954 - K20291 COG4, COD1 conserved oligomeric Golgi complex subunit 4, at 1,398,655 to 1,401,525 8954
Group Condition mRNA_582 mRNA_583 mRNA_584 mRNA_585 mRNA_586
8950 8951 8952 8953 8954
facs on lipid accumulation Sorted High BODIPY Gate N.D. -0.5 -0.7 +0.2 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. +0.1 -0.4 -0.5 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -0.1 -0.6 -0.1 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -0.4 -0.3 -0.1 N.D.
facs on lipid accumulation Sorted No BODIPY Gate N.D. -0.1 -0.3 -0.3 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -0.4 -0.0 -0.1 N.D.
growth on ricinoleic acid YNB Glucose N.D. -0.1 -0.2 -0.1 N.D.
auxotrophy YNB Glucose 75mM Arginine N.D. -0.2 -0.0 -0.1 N.D.
auxotrophy Dropout Complete N.D. -0.2 +0.0 -0.0 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. +0.2 -0.1 -0.3 N.D.
growth on ypd YPD N.D. -0.2 +0.4 -0.3 N.D.
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.1 -0.0 -0.0 N.D.
growth on oleic acid YNB Oleic Acid N.D. -0.1 -0.0 -0.0 N.D.
growth on oleic acid YNB Glucose N.D. -0.1 +0.1 -0.0 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. +0.2 +0.2 -0.5 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.3 +0.1 -0.5 N.D.
auxotrophy YNB Glucose N.D. -0.0 +0.1 -0.1 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation N.D. +0.5 -0.9 +0.5 N.D.
ypd buoyancy 40 hrs Median Buoyancy N.D. -0.0 +0.3 +0.0 N.D.
ypd buoyancy 40 hrs High Buoyancy N.D. +0.1 +0.0 +0.3 N.D.
auxotrophy YNB Glucose 75mM Methionine N.D. +0.2 +0.5 +0.1 N.D.
remove
mRNA_582
plot
remove
mRNA_583
plot
remove
mRNA_584
remove
mRNA_585
plot
remove
mRNA_586
plot