Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 8951 and 8952 are separated by 145 nucleotides8952 and 8953 are separated by 314 nucleotides8953 and 8954 are separated by 164 nucleotides8954 and 8955 are separated by 348 nucleotides mRNA_583: 8951 - HMMPfam-Protein of Unknown function (DUF1690)-PF07956, at 1,393,876 to 1,394,660 8951 mRNA_584: 8952 - K01259 pip proline iminopeptidase, at 1,394,806 to 1,396,431 8952 mRNA_585: 8953 - HMMPfam-Polynucleotide kinase 3 phosphatase-PF08645,HMMPfam-AAA domain-PF13671,SUPERFAMILY--SSF52540,SUPERFAMILY--SSF56784, at 1,396,746 to 1,398,490 8953 mRNA_586: 8954 - K20291 COG4, COD1 conserved oligomeric Golgi complex subunit 4, at 1,398,655 to 1,401,525 8954 mRNA_587: 8955 - K10846 ERCC5, XPG, RAD2 DNA excision repair protein ERCC-5, at 1,401,874 to 1,405,590 8955
Group Condition mRNA_583 mRNA_584 mRNA_585 mRNA_586 mRNA_587
8951 8952 8953 8954 8955
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 -0.6 -0.1 N.D. -1.5
facs on lipid accumulation Sorted High BODIPY Gate -0.5 -0.7 +0.2 N.D. -1.1
facs on lipid accumulation Sorted No BODIPY Gate -0.1 -0.3 -0.3 N.D. -1.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 -0.4 -0.5 N.D. -0.4
growth on ricinoleic acid YNB Methylricinoleic Acid -0.4 -0.0 -0.1 N.D. -0.4
growth on ricinoleic acid YNB Ricinoleic Acid -0.4 -0.3 -0.1 N.D. -0.1
growth on oleic acid YNB Oleic Acid -0.1 -0.0 -0.0 N.D. -0.3
growth on ricinoleic acid YNB Glucose -0.1 -0.2 -0.1 N.D. +0.0
growth on oleic acid YNB Glucose -0.1 +0.1 -0.0 N.D. -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 -0.1 -0.3 N.D. -0.0
auxotrophy YNB Glucose 75mM Arginine -0.2 -0.0 -0.1 N.D. +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.3 +0.1 -0.5 N.D. -0.2
ypd buoyancy 40 hrs No Buoyancy Separation +0.5 -0.9 +0.5 N.D. -0.1
growth on ypd YPD -0.2 +0.4 -0.3 N.D. +0.2
auxotrophy Dropout Complete -0.2 +0.0 -0.0 N.D. +0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.2 +0.2 -0.5 N.D. +0.1
ypd buoyancy 40 hrs Low Buoyancy -0.1 -0.0 -0.0 N.D. +0.2
auxotrophy YNB Glucose -0.0 +0.1 -0.1 N.D. +0.2
ypd buoyancy 40 hrs Median Buoyancy -0.0 +0.3 +0.0 N.D. +0.1
ypd buoyancy 40 hrs High Buoyancy +0.1 +0.0 +0.3 N.D. +0.2
auxotrophy YNB Glucose 75mM Methionine +0.2 +0.5 +0.1 N.D. -0.0
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