Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 8952 and 8953 are separated by 314 nucleotides8953 and 8954 are separated by 164 nucleotides8954 and 8955 are separated by 348 nucleotides8955 and 8956 are separated by 802 nucleotides mRNA_584: 8952 - K01259 pip proline iminopeptidase, at 1,394,806 to 1,396,431 8952 mRNA_585: 8953 - HMMPfam-Polynucleotide kinase 3 phosphatase-PF08645,HMMPfam-AAA domain-PF13671,SUPERFAMILY--SSF52540,SUPERFAMILY--SSF56784, at 1,396,746 to 1,398,490 8953 mRNA_586: 8954 - K20291 COG4, COD1 conserved oligomeric Golgi complex subunit 4, at 1,398,655 to 1,401,525 8954 mRNA_587: 8955 - K10846 ERCC5, XPG, RAD2 DNA excision repair protein ERCC-5, at 1,401,874 to 1,405,590 8955 mRNA_588: 8956 - K12609 CAF120 CCR4-NOT transcriptional complex subunit CAF120, at 1,406,393 to 1,408,614 8956
Group Condition mRNA_584 mRNA_585 mRNA_586 mRNA_587 mRNA_588
8952 8953 8954 8955 8956
facs on lipid accumulation Sorted Low BODIPY Gate -0.6 -0.1 N.D. -1.5 -0.0
facs on lipid accumulation Sorted No BODIPY Gate -0.3 -0.3 N.D. -1.1 +0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.7 +0.2 N.D. -1.1 +0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.4 -0.5 N.D. -0.4 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.0 -0.1 N.D. -0.4 -0.3
growth on ricinoleic acid YNB Ricinoleic Acid -0.3 -0.1 N.D. -0.1 -0.3
growth on oleic acid YNB Oleic Acid -0.0 -0.0 N.D. -0.3 -0.2
ypd buoyancy 40 hrs No Buoyancy Separation -0.9 +0.5 N.D. -0.1 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 -0.5 N.D. -0.2 -0.1
growth on ricinoleic acid YNB Glucose -0.2 -0.1 N.D. +0.0 -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.2 -0.5 N.D. +0.1 -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 -0.3 N.D. -0.0 -0.1
auxotrophy YNB Glucose 75mM Arginine -0.0 -0.1 N.D. +0.1 -0.3
growth on oleic acid YNB Glucose +0.1 -0.0 N.D. -0.1 -0.2
auxotrophy Dropout Complete +0.0 -0.0 N.D. +0.2 -0.4
growth on ypd YPD +0.4 -0.3 N.D. +0.2 -0.3
auxotrophy YNB Glucose +0.1 -0.1 N.D. +0.2 -0.2
ypd buoyancy 40 hrs Low Buoyancy -0.0 -0.0 N.D. +0.2 +0.1
auxotrophy YNB Glucose 75mM Methionine +0.5 +0.1 N.D. -0.0 -0.2
ypd buoyancy 40 hrs Median Buoyancy +0.3 +0.0 N.D. +0.1 +0.2
ypd buoyancy 40 hrs High Buoyancy +0.0 +0.3 N.D. +0.2 +0.0
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