Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 8955 and 8956 are separated by 802 nucleotides8956 and 8957 are separated by 4105 nucleotides8957 and 8958 are separated by 274 nucleotides8958 and 8959 are separated by 114 nucleotides mRNA_587: 8955 - K10846 ERCC5, XPG, RAD2 DNA excision repair protein ERCC-5, at 1,401,874 to 1,405,590 8955 mRNA_588: 8956 - K12609 CAF120 CCR4-NOT transcriptional complex subunit CAF120, at 1,406,393 to 1,408,614 8956 mRNA_589: 8957 - KOG1763 Uncharacterized conserved protein, contains CCCH-type Zn-finger, at 1,412,720 to 1,414,364 8957 mRNA_590: 8958 - K05543 DUS2 tRNA-dihydrouridine synthase 2, at 1,414,639 to 1,416,336 8958 mRNA_591: 8959 - K01915 glnA, GLUL glutamine synthetase, at 1,416,451 to 1,418,413 8959
Group Condition mRNA_587 mRNA_588 mRNA_589 mRNA_590 mRNA_591
8955 8956 8957 8958 8959
facs on lipid accumulation Sorted Low BODIPY Gate -1.5 -0.0 -0.5 N.D. -0.2
facs on lipid accumulation Sorted High BODIPY Gate -1.1 +0.0 -0.4 N.D. -0.2
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 -0.1 -0.7 N.D. -0.5
growth on oleic acid YNB Glucose -0.1 -0.2 -0.7 N.D. -0.1
auxotrophy Dropout Complete +0.2 -0.4 -0.7 N.D. -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.4 -0.3 +0.1 N.D. -0.5
growth on oleic acid YNB Oleic Acid -0.3 -0.2 +0.1 N.D. -0.4
facs on lipid accumulation Sorted No BODIPY Gate -1.1 +0.1 +0.2 N.D. +0.0
auxotrophy YNB Glucose 75mM Methionine -0.0 -0.2 -0.0 N.D. -0.5
ypd buoyancy 40 hrs Low Buoyancy +0.2 +0.1 -0.4 N.D. -0.6
auxotrophy YNB Glucose +0.2 -0.2 -0.2 N.D. -0.5
auxotrophy YNB Glucose 75mM Arginine +0.1 -0.3 -0.1 N.D. -0.3
growth on ypd YPD +0.2 -0.3 -0.6 N.D. +0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 -0.3 +0.4 N.D. -0.4
ypd buoyancy 40 hrs High Buoyancy +0.2 +0.0 -0.3 N.D. -0.1
growth on ricinoleic acid YNB Glucose +0.0 -0.3 +0.3 N.D. -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 -0.3 +0.4 N.D. -0.2
ypd buoyancy 40 hrs Median Buoyancy +0.1 +0.2 -0.1 N.D. -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.4 -0.2 +0.5 N.D. +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 -0.1 +0.4 N.D. +0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.0 -0.1 +0.8 N.D. -0.0
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