Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
8959 and 8960 are separated by 126 nucleotides
8960 and 8961 are separated by 334 nucleotides
8961 and 8962 are separated by 638 nucleotides
8962 and 8963 are separated by 520 nucleotides
mRNA_591: 8959 - K01915 glnA, GLUL glutamine synthetase, at 1,416,451 to 1,418,413
8959
mRNA_592: 8960 - K10747 LIG1 DNA ligase 1, at 1,418,540 to 1,422,145
8960
mRNA_593: 8961 - K18469 TBC1D5 TBC1 domain family member 5, at 1,422,480 to 1,425,082
8961
mRNA_594: 8962 - K16261 YAT yeast amino acid transporter, at 1,425,721 to 1,428,613
8962
mRNA_595: 8963 - KOG0137 Very-long-chain acyl-CoA dehydrogenase, at 1,429,134 to 1,431,703
8963
Group
Condition
mRNA
_591
mRNA
_592
mRNA
_593
mRNA
_594
mRNA
_595
8959
8960
8961
8962
8963
ypd buoyancy
40 hrs No Buoyancy Separation
-0.5
-0.7
-1.1
-0.1
+0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.4
+0.1
-0.2
+0.0
-1.3
growth on oleic acid
YNB Oleic Acid
-0.4
-0.1
+0.7
+0.1
-2.1
facs on lipid accumulation
Sorted High BODIPY Gate
-0.2
+0.0
-0.6
-0.7
-0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.5
-0.1
+0.7
-0.3
-1.3
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.2
+0.0
-0.8
-0.1
-0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.2
-0.0
-0.2
+0.0
-0.3
ypd buoyancy
40 hrs Low Buoyancy
-0.6
-0.3
-0.4
+0.5
+0.1
auxotrophy
Dropout Complete
-0.2
+0.0
-0.0
-0.0
-0.1
growth on ricinoleic acid
YNB Glucose
-0.1
+0.1
+0.1
-0.1
-0.1
auxotrophy
YNB Glucose
-0.5
+0.1
+0.2
-0.0
+0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.0
-0.1
-0.1
+0.2
-0.1
growth on oleic acid
YNB Glucose
-0.1
+0.1
+0.5
-0.1
-0.5
facs on lipid accumulation
Sorted No BODIPY Gate
+0.0
+0.0
-0.2
+0.2
-0.1
auxotrophy
YNB Glucose 75mM Methionine
-0.5
+0.2
+0.1
+0.1
+0.1
growth on ypd
YPD
+0.1
-0.2
+0.0
+0.4
-0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.4
+0.0
-0.0
+0.1
-0.4
ypd buoyancy
40 hrs High Buoyancy
-0.1
-0.3
-0.2
+0.6
+0.1
ypd buoyancy
40 hrs Median Buoyancy
-0.1
-0.3
+0.2
+0.5
+0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.2
+0.1
+0.0
+0.1
-0.2
auxotrophy
YNB Glucose 75mM Arginine
-0.3
+0.2
+0.6
-0.2
+0.1
remove
mRNA_591
plot
remove
mRNA_592
plot
remove
mRNA_593
remove
mRNA_594
plot
remove
mRNA_595
plot