Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 8959 and 8960 are separated by 126 nucleotides8960 and 8961 are separated by 334 nucleotides8961 and 8962 are separated by 638 nucleotides8962 and 8963 are separated by 520 nucleotides mRNA_591: 8959 - K01915 glnA, GLUL glutamine synthetase, at 1,416,451 to 1,418,413 8959 mRNA_592: 8960 - K10747 LIG1 DNA ligase 1, at 1,418,540 to 1,422,145 8960 mRNA_593: 8961 - K18469 TBC1D5 TBC1 domain family member 5, at 1,422,480 to 1,425,082 8961 mRNA_594: 8962 - K16261 YAT yeast amino acid transporter, at 1,425,721 to 1,428,613 8962 mRNA_595: 8963 - KOG0137 Very-long-chain acyl-CoA dehydrogenase, at 1,429,134 to 1,431,703 8963
Group Condition mRNA_591 mRNA_592 mRNA_593 mRNA_594 mRNA_595
8959 8960 8961 8962 8963
ypd buoyancy 40 hrs No Buoyancy Separation -0.5 -0.7 -1.1 -0.1 +0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.4 +0.1 -0.2 +0.0 -1.3
growth on oleic acid YNB Oleic Acid -0.4 -0.1 +0.7 +0.1 -2.1
facs on lipid accumulation Sorted High BODIPY Gate -0.2 +0.0 -0.6 -0.7 -0.0
growth on ricinoleic acid YNB Methylricinoleic Acid -0.5 -0.1 +0.7 -0.3 -1.3
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 +0.0 -0.8 -0.1 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 -0.0 -0.2 +0.0 -0.3
ypd buoyancy 40 hrs Low Buoyancy -0.6 -0.3 -0.4 +0.5 +0.1
auxotrophy Dropout Complete -0.2 +0.0 -0.0 -0.0 -0.1
growth on ricinoleic acid YNB Glucose -0.1 +0.1 +0.1 -0.1 -0.1
auxotrophy YNB Glucose -0.5 +0.1 +0.2 -0.0 +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.0 -0.1 -0.1 +0.2 -0.1
growth on oleic acid YNB Glucose -0.1 +0.1 +0.5 -0.1 -0.5
facs on lipid accumulation Sorted No BODIPY Gate +0.0 +0.0 -0.2 +0.2 -0.1
auxotrophy YNB Glucose 75mM Methionine -0.5 +0.2 +0.1 +0.1 +0.1
growth on ypd YPD +0.1 -0.2 +0.0 +0.4 -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.4 +0.0 -0.0 +0.1 -0.4
ypd buoyancy 40 hrs High Buoyancy -0.1 -0.3 -0.2 +0.6 +0.1
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.3 +0.2 +0.5 +0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 +0.1 +0.0 +0.1 -0.2
auxotrophy YNB Glucose 75mM Arginine -0.3 +0.2 +0.6 -0.2 +0.1
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