Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
8961 and 8962 are separated by 638 nucleotides
8962 and 8963 are separated by 520 nucleotides
8963 and 8964 are separated by 444 nucleotides
8964 and 8965 are separated by 1408 nucleotides
mRNA_593: 8961 - K18469 TBC1D5 TBC1 domain family member 5, at 1,422,480 to 1,425,082
8961
mRNA_594: 8962 - K16261 YAT yeast amino acid transporter, at 1,425,721 to 1,428,613
8962
mRNA_595: 8963 - KOG0137 Very-long-chain acyl-CoA dehydrogenase, at 1,429,134 to 1,431,703
8963
mRNA_596: 8964 - Hypothetical Protein, at 1,432,148 to 1,433,908
8964
mRNA_597: 8965 - ProSiteProfiles-APSES-type HTH DNA-binding domain profile.-PS51299,SUPERFAMILY--SSF54616, at 1,435,317 to 1,436,977
8965
Group
Condition
mRNA
_593
mRNA
_594
mRNA
_595
mRNA
_596
mRNA
_597
8961
8962
8963
8964
8965
ypd buoyancy
40 hrs No Buoyancy Separation
-1.1
-0.1
+0.1
-1.0
-1.3
facs on lipid accumulation
Sorted High BODIPY Gate
-0.6
-0.7
-0.0
+0.0
-0.7
growth on oleic acid
YNB Oleic Acid
+0.7
+0.1
-2.1
-0.1
-0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.2
+0.0
-1.3
-0.3
+0.4
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.8
-0.1
-0.2
+0.3
-0.5
auxotrophy
Dropout Complete
-0.0
-0.0
-0.1
+0.1
-0.6
growth on oleic acid
YNB Glucose
+0.5
-0.1
-0.5
-0.3
-0.1
auxotrophy
YNB Glucose 75mM Arginine
+0.6
-0.2
+0.1
-0.1
-0.7
ypd buoyancy
40 hrs Low Buoyancy
-0.4
+0.5
+0.1
-0.3
-0.1
auxotrophy
YNB Glucose 75mM Methionine
+0.1
+0.1
+0.1
+0.2
-0.6
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.7
-0.3
-1.3
+0.1
+0.8
auxotrophy
YNB Glucose
+0.2
-0.0
+0.1
+0.1
-0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.0
+0.1
-0.4
-0.3
+0.7
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.2
+0.0
-0.3
-0.4
+1.1
ypd buoyancy
40 hrs Median Buoyancy
+0.2
+0.5
+0.0
-0.6
+0.2
growth on ricinoleic acid
YNB Glucose
+0.1
-0.1
-0.1
-0.0
+0.5
facs on lipid accumulation
Sorted No BODIPY Gate
-0.2
+0.2
-0.1
+0.7
-0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.0
+0.1
-0.2
-0.3
+0.9
ypd buoyancy
40 hrs High Buoyancy
-0.2
+0.6
+0.1
-0.6
+0.7
growth on ypd
YPD
+0.0
+0.4
-0.2
+0.7
-0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
+0.2
-0.1
+0.2
+0.9
remove
mRNA_593
plot
remove
mRNA_594
plot
remove
mRNA_595
remove
mRNA_596
plot
remove
mRNA_597
plot