Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 8963 and 8964 are separated by 444 nucleotides8964 and 8965 are separated by 1408 nucleotides8965 and 8966 are separated by 910 nucleotides8966 and 8967 are separated by 133 nucleotides mRNA_595: 8963 - KOG0137 Very-long-chain acyl-CoA dehydrogenase, at 1,429,134 to 1,431,703 8963 mRNA_596: 8964 - Hypothetical Protein, at 1,432,148 to 1,433,908 8964 mRNA_597: 8965 - ProSiteProfiles-APSES-type HTH DNA-binding domain profile.-PS51299,SUPERFAMILY--SSF54616, at 1,435,317 to 1,436,977 8965 mRNA_598: 8966 - ProSiteProfiles-F-box domain profile.-PS50181, at 1,437,888 to 1,441,324 8966 mRNA_599: 8967 - HMMPfam-2'-5' RNA ligase superfamily-PF13563,SUPERFAMILY--SSF55144, at 1,441,458 to 1,442,153 8967
Group Condition mRNA_595 mRNA_596 mRNA_597 mRNA_598 mRNA_599
8963 8964 8965 8966 8967
ypd buoyancy 40 hrs No Buoyancy Separation +0.1 -1.0 -1.3 +0.5 -0.6
growth on oleic acid YNB Oleic Acid -2.1 -0.1 -0.2 -0.0 +0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 +0.3 -0.5 -0.1 -0.8
growth on ricinoleic acid YNB Ricinoleic Acid -1.3 -0.3 +0.4 -0.1 +0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.0 +0.0 -0.7 -0.0 -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 -0.4 +1.1 -0.0 -1.4
ypd buoyancy 40 hrs Median Buoyancy +0.0 -0.6 +0.2 -0.1 -0.5
growth on ricinoleic acid YNB Methylricinoleic Acid -1.3 +0.1 +0.8 -0.2 -0.3
growth on oleic acid YNB Glucose -0.5 -0.3 -0.1 +0.1 -0.1
ypd buoyancy 40 hrs Low Buoyancy +0.1 -0.3 -0.1 -0.1 -0.4
auxotrophy YNB Glucose 75mM Methionine +0.1 +0.2 -0.6 +0.1 -0.4
auxotrophy Dropout Complete -0.1 +0.1 -0.6 -0.1 +0.3
auxotrophy YNB Glucose 75mM Arginine +0.1 -0.1 -0.7 +0.2 +0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.1 +0.7 -0.2 -0.1 -0.5
growth on ricinoleic acid YNB Glucose -0.1 -0.0 +0.5 -0.2 -0.3
ypd buoyancy 40 hrs High Buoyancy +0.1 -0.6 +0.7 -0.0 -0.3
growth on ypd YPD -0.2 +0.7 -0.3 +0.1 -0.4
auxotrophy YNB Glucose +0.1 +0.1 -0.3 -0.1 +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 -0.3 +0.9 +0.1 -0.5
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.4 -0.3 +0.7 +0.3 +0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 +0.2 +0.9 +0.4 +0.7
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