Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 8965 and 8966 are separated by 910 nucleotides8966 and 8967 are separated by 133 nucleotides8967 and 8968 are separated by 1119 nucleotides8968 and 8969 are separated by 428 nucleotides mRNA_597: 8965 - ProSiteProfiles-APSES-type HTH DNA-binding domain profile.-PS51299,SUPERFAMILY--SSF54616, at 1,435,317 to 1,436,977 8965 mRNA_598: 8966 - ProSiteProfiles-F-box domain profile.-PS50181, at 1,437,888 to 1,441,324 8966 mRNA_599: 8967 - HMMPfam-2'-5' RNA ligase superfamily-PF13563,SUPERFAMILY--SSF55144, at 1,441,458 to 1,442,153 8967 mRNA_600: 8968 - K17785 IMMT, FCJ1, MNOS2 mitofilin, at 1,443,273 to 1,445,582 8968 mRNA_601: 8969 - K01784 galE, GALE UDP-glucose 4-epimerase, at 1,446,011 to 1,447,734 8969
Group Condition mRNA_597 mRNA_598 mRNA_599 mRNA_600 mRNA_601
8965 8966 8967 8968 8969
facs on lipid accumulation Sorted Low BODIPY Gate -0.5 -0.1 -0.8 -0.6 N.D.
facs on lipid accumulation Sorted High BODIPY Gate -0.7 -0.0 -0.3 -0.9 N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.2 -0.1 -0.5 -0.7 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation -1.3 +0.5 -0.6 +0.0 N.D.
auxotrophy YNB Glucose 75mM Methionine -0.6 +0.1 -0.4 -0.4 N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.1 -0.1 -0.4 -0.7 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +0.4 -0.1 +0.1 -1.6 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid +0.8 -0.2 -0.3 -1.4 N.D.
auxotrophy YNB Glucose 75mM Arginine -0.7 +0.2 +0.2 -0.7 N.D.
auxotrophy YNB Glucose -0.3 -0.1 +0.1 -0.7 N.D.
auxotrophy Dropout Complete -0.6 -0.1 +0.3 -0.3 N.D.
growth on ricinoleic acid YNB Glucose +0.5 -0.2 -0.3 -0.7 N.D.
growth on ypd YPD -0.3 +0.1 -0.4 -0.1 N.D.
growth on oleic acid YNB Oleic Acid -0.2 -0.0 +0.1 -0.5 N.D.
growth on oleic acid YNB Glucose -0.1 +0.1 -0.1 -0.5 N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.2 -0.1 -0.5 -0.1 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +1.1 -0.0 -1.4 +0.1 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.9 +0.1 -0.5 +0.0 N.D.
ypd buoyancy 40 hrs High Buoyancy +0.7 -0.0 -0.3 +0.2 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.7 +0.3 +0.3 +0.2 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.9 +0.4 +0.7 -0.3 N.D.
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