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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
8969 and 8970 are separated by 277 nucleotides
8970 and 8971 are separated by 554 nucleotides
8971 and 8972 are separated by 387 nucleotides
8972 and 8973 are separated by 348 nucleotides
mRNA_601: 8969 - K01784 galE, GALE UDP-glucose 4-epimerase, at 1,446,011 to 1,447,734
8969
mRNA_602: 8970 - K14642 YND1 golgi apyrase, at 1,448,012 to 1,450,852
8970
mRNA_603: 8971 - Hypothetical Protein, at 1,451,407 to 1,452,135
8971
mRNA_604: 8972 - K17871 ndh1 NADH-ubiquinone reductase (non-electrogenic), at 1,452,523 to 1,454,931
8972
mRNA_605: 8973 - SUPERFAMILY--SSF52047, at 1,455,280 to 1,456,250
8973
Group
Condition
mRNA
_601
mRNA
_602
mRNA
_603
mRNA
_604
mRNA
_605
8969
8970
8971
8972
8973
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
+0.3
N.D.
-2.3
-0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
-0.4
N.D.
-1.3
-0.0
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
-0.2
N.D.
-1.4
+0.1
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
+0.3
N.D.
-0.4
-1.1
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
-0.3
N.D.
-0.5
-0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
+0.1
N.D.
-0.8
-0.4
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
-0.2
N.D.
-0.7
-0.0
ypd buoyancy
40 hrs High Buoyancy
N.D.
+0.1
N.D.
-0.4
-0.2
auxotrophy
YNB Glucose 75mM Methionine
N.D.
+0.5
N.D.
-0.8
-0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
-0.5
N.D.
+0.3
-0.2
growth on oleic acid
YNB Glucose
N.D.
+0.5
N.D.
-0.4
-0.4
ypd buoyancy
40 hrs Median Buoyancy
N.D.
+0.2
N.D.
-0.3
+0.0
growth on ypd
YPD
N.D.
-0.5
N.D.
+0.0
+0.4
growth on ricinoleic acid
YNB Glucose
N.D.
+0.6
N.D.
-0.5
-0.0
auxotrophy
YNB Glucose 75mM Arginine
N.D.
+0.5
N.D.
-0.4
+0.1
auxotrophy
YNB Glucose
N.D.
+0.6
N.D.
-0.4
-0.0
ypd buoyancy
40 hrs Low Buoyancy
N.D.
+0.4
N.D.
+0.3
-0.2
auxotrophy
Dropout Complete
N.D.
+0.5
N.D.
-0.1
+0.2
growth on oleic acid
YNB Oleic Acid
N.D.
+0.9
N.D.
+1.2
-0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
+1.9
N.D.
+0.5
+0.6
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
+1.4
N.D.
+2.1
+0.3
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