Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 8973 and 8974 are separated by 998 nucleotides8974 and 8975 are separated by 269 nucleotides8975 and 8976 are separated by 1301 nucleotides8976 and 8977 are separated by 555 nucleotides mRNA_605: 8973 - SUPERFAMILY--SSF52047, at 1,455,280 to 1,456,250 8973 mRNA_606: 8974 - K06867 K06867 uncharacterized protein, at 1,457,249 to 1,458,122 8974 mRNA_607: 8975 - K00140 mmsA, iolA, ALDH6A1 malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase, at 1,458,392 to 1,460,964 8975 mRNA_608: 8976 - K09490 HSPA5, BIP heat shock 70kDa protein 5, at 1,462,266 to 1,464,196 8976 mRNA_609: 8977 - K19001 HELLS, DDM1 ATP-dependent DNA helicase, at 1,464,752 to 1,468,761 8977
Group Condition mRNA_605 mRNA_606 mRNA_607 mRNA_608 mRNA_609
8973 8974 8975 8976 8977
growth on ricinoleic acid YNB Methylricinoleic Acid +0.3 N.D. -1.1 N.D. -0.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.4 N.D. -0.3 N.D. -0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.3 N.D. -0.5 N.D. +0.1
growth on oleic acid YNB Glucose -0.4 N.D. -0.2 N.D. -0.0
growth on ricinoleic acid YNB Glucose -0.0 N.D. -0.3 N.D. -0.2
growth on ricinoleic acid YNB Ricinoleic Acid +0.6 N.D. -0.4 N.D. -0.7
facs on lipid accumulation Sorted Low BODIPY Gate -0.0 N.D. -0.2 N.D. -0.1
auxotrophy YNB Glucose 75mM Methionine -0.2 N.D. -0.2 N.D. +0.0
facs on lipid accumulation Sorted High BODIPY Gate -1.1 N.D. +0.2 N.D. +0.5
growth on oleic acid YNB Oleic Acid -0.0 N.D. -0.1 N.D. -0.2
ypd buoyancy 40 hrs Low Buoyancy -0.2 N.D. +0.1 N.D. -0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 N.D. -0.0 N.D. +0.1
ypd buoyancy 40 hrs High Buoyancy -0.2 N.D. +0.1 N.D. -0.0
ypd buoyancy 40 hrs Median Buoyancy +0.0 N.D. -0.1 N.D. -0.0
auxotrophy YNB Glucose -0.0 N.D. -0.1 N.D. +0.2
auxotrophy YNB Glucose 75mM Arginine +0.1 N.D. -0.2 N.D. +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 N.D. -0.1 N.D. +0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.0 N.D. -0.0 N.D. +0.4
auxotrophy Dropout Complete +0.2 N.D. -0.1 N.D. +0.2
facs on lipid accumulation Sorted No BODIPY Gate +0.1 N.D. +0.3 N.D. +0.2
growth on ypd YPD +0.4 N.D. +0.2 N.D. +0.0
remove
mRNA_605
plot		 remove
mRNA_606
plot		 remove
mRNA_607		 remove
mRNA_608
plot		 remove
mRNA_609
plot