Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 8979 and 8980 are separated by 109 nucleotides8980 and 8981 are separated by 147 nucleotides8981 and 8982 are separated by 360 nucleotides8982 and 8983 are separated by 240 nucleotides mRNA_611: 8979 - K00490 CYP4F cytochrome P450, family 4, subfamily F, at 1,470,707 to 1,472,980 8979 mRNA_612: 8980 - KOG3183 Predicted Zn-finger protein, at 1,473,090 to 1,474,198 8980 mRNA_613: 8981 - K10631 TOPORS E3 ubiquitin-protein ligase Topors, at 1,474,346 to 1,477,518 8981 mRNA_614: 8982 - K06875 PDCD5, TFAR19 programmed cell death protein 5, at 1,477,879 to 1,478,544 8982 mRNA_615: 8983 - HMMPfam-Haloacid dehalogenase-like hydrolase-PF13419,SUPERFAMILY--SSF56784, at 1,478,785 to 1,480,102 8983
Group Condition mRNA_611 mRNA_612 mRNA_613 mRNA_614 mRNA_615
8979 8980 8981 8982 8983
auxotrophy Dropout Complete -1.3 -0.2 -1.4 N.D. +0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.4 -0.5 -1.0 N.D. -0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3 -0.4 -0.5 N.D. -0.4
growth on ricinoleic acid YNB Methylricinoleic Acid -0.4 +0.2 -0.7 N.D. -0.6
auxotrophy YNB Glucose 75mM Arginine -0.3 -0.1 -0.9 N.D. +0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.3 -0.3 -0.1 N.D. -0.5
growth on ricinoleic acid YNB Glucose -0.0 +0.3 -0.6 N.D. -0.7
auxotrophy YNB Glucose -0.1 -0.1 -0.7 N.D. -0.1
auxotrophy YNB Glucose 75mM Methionine -0.2 -0.2 -0.8 N.D. +0.2
facs on lipid accumulation Sorted Low BODIPY Gate -1.1 -0.1 -0.1 N.D. +0.4
facs on lipid accumulation Sorted No BODIPY Gate -0.5 +0.1 -0.5 N.D. +0.0
growth on oleic acid YNB Glucose +0.4 -0.1 -0.8 N.D. -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.7 -0.5 -0.9 N.D. +0.0
growth on oleic acid YNB Oleic Acid +0.2 +0.1 -0.4 N.D. -0.4
ypd buoyancy 40 hrs Low Buoyancy -0.3 -0.1 +0.0 N.D. -0.1
ypd buoyancy 40 hrs No Buoyancy Separation +0.7 -0.2 -0.4 N.D. -0.3
facs on lipid accumulation Sorted High BODIPY Gate -0.2 -0.1 -0.2 N.D. +0.5
ypd buoyancy 40 hrs High Buoyancy -0.0 +0.1 -0.2 N.D. +0.1
ypd buoyancy 40 hrs Median Buoyancy +0.1 +0.1 +0.1 N.D. -0.1
growth on ypd YPD +0.6 -0.1 -0.4 N.D. +0.5
growth on ricinoleic acid YNB Ricinoleic Acid +0.6 +0.5 -0.1 N.D. -0.2
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