Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
8979 and 8980 are separated by 109 nucleotides
8980 and 8981 are separated by 147 nucleotides
8981 and 8982 are separated by 360 nucleotides
8982 and 8983 are separated by 240 nucleotides
mRNA_611: 8979 - K00490 CYP4F cytochrome P450, family 4, subfamily F, at 1,470,707 to 1,472,980
8979
mRNA_612: 8980 - KOG3183 Predicted Zn-finger protein, at 1,473,090 to 1,474,198
8980
mRNA_613: 8981 - K10631 TOPORS E3 ubiquitin-protein ligase Topors, at 1,474,346 to 1,477,518
8981
mRNA_614: 8982 - K06875 PDCD5, TFAR19 programmed cell death protein 5, at 1,477,879 to 1,478,544
8982
mRNA_615: 8983 - HMMPfam-Haloacid dehalogenase-like hydrolase-PF13419,SUPERFAMILY--SSF56784, at 1,478,785 to 1,480,102
8983
Group
Condition
mRNA
_611
mRNA
_612
mRNA
_613
mRNA
_614
mRNA
_615
8979
8980
8981
8982
8983
auxotrophy
Dropout Complete
-1.3
-0.2
-1.4
N.D.
+0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.4
-0.5
-1.0
N.D.
-0.4
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.3
-0.4
-0.5
N.D.
-0.4
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.4
+0.2
-0.7
N.D.
-0.6
auxotrophy
YNB Glucose 75mM Arginine
-0.3
-0.1
-0.9
N.D.
+0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.3
-0.3
-0.1
N.D.
-0.5
growth on ricinoleic acid
YNB Glucose
-0.0
+0.3
-0.6
N.D.
-0.7
auxotrophy
YNB Glucose
-0.1
-0.1
-0.7
N.D.
-0.1
auxotrophy
YNB Glucose 75mM Methionine
-0.2
-0.2
-0.8
N.D.
+0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
-1.1
-0.1
-0.1
N.D.
+0.4
facs on lipid accumulation
Sorted No BODIPY Gate
-0.5
+0.1
-0.5
N.D.
+0.0
growth on oleic acid
YNB Glucose
+0.4
-0.1
-0.8
N.D.
-0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.7
-0.5
-0.9
N.D.
+0.0
growth on oleic acid
YNB Oleic Acid
+0.2
+0.1
-0.4
N.D.
-0.4
ypd buoyancy
40 hrs Low Buoyancy
-0.3
-0.1
+0.0
N.D.
-0.1
ypd buoyancy
40 hrs No Buoyancy Separation
+0.7
-0.2
-0.4
N.D.
-0.3
facs on lipid accumulation
Sorted High BODIPY Gate
-0.2
-0.1
-0.2
N.D.
+0.5
ypd buoyancy
40 hrs High Buoyancy
-0.0
+0.1
-0.2
N.D.
+0.1
ypd buoyancy
40 hrs Median Buoyancy
+0.1
+0.1
+0.1
N.D.
-0.1
growth on ypd
YPD
+0.6
-0.1
-0.4
N.D.
+0.5
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.6
+0.5
-0.1
N.D.
-0.2
remove
mRNA_611
plot
remove
mRNA_612
plot
remove
mRNA_613
remove
mRNA_614
plot
remove
mRNA_615
plot