Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 8980 and 8981 are separated by 147 nucleotides8981 and 8982 are separated by 360 nucleotides8982 and 8983 are separated by 240 nucleotides8983 and 8984 are separated by 490 nucleotides mRNA_612: 8980 - KOG3183 Predicted Zn-finger protein, at 1,473,090 to 1,474,198 8980 mRNA_613: 8981 - K10631 TOPORS E3 ubiquitin-protein ligase Topors, at 1,474,346 to 1,477,518 8981 mRNA_614: 8982 - K06875 PDCD5, TFAR19 programmed cell death protein 5, at 1,477,879 to 1,478,544 8982 mRNA_615: 8983 - HMMPfam-Haloacid dehalogenase-like hydrolase-PF13419,SUPERFAMILY--SSF56784, at 1,478,785 to 1,480,102 8983 mRNA_616: 8984 - HMMPfam-Hsp70 protein-PF00012,SUPERFAMILY--SSF100934, at 1,480,593 to 1,481,006 8984
Group Condition mRNA_612 mRNA_613 mRNA_614 mRNA_615 mRNA_616
8980 8981 8982 8983 8984
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.5 -1.0 N.D. -0.4 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.5 -0.9 N.D. +0.0 N.D.
auxotrophy Dropout Complete -0.2 -1.4 N.D. +0.2 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.4 -0.5 N.D. -0.4 N.D.
growth on oleic acid YNB Glucose -0.1 -0.8 N.D. -0.3 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid +0.2 -0.7 N.D. -0.6 N.D.
auxotrophy YNB Glucose 75mM Arginine -0.1 -0.9 N.D. +0.0 N.D.
growth on ricinoleic acid YNB Glucose +0.3 -0.6 N.D. -0.7 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.3 -0.1 N.D. -0.5 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 -0.4 N.D. -0.3 N.D.
auxotrophy YNB Glucose -0.1 -0.7 N.D. -0.1 N.D.
auxotrophy YNB Glucose 75mM Methionine -0.2 -0.8 N.D. +0.2 N.D.
growth on oleic acid YNB Oleic Acid +0.1 -0.4 N.D. -0.4 N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.1 -0.5 N.D. +0.0 N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.1 +0.0 N.D. -0.1 N.D.
ypd buoyancy 40 hrs High Buoyancy +0.1 -0.2 N.D. +0.1 N.D.
growth on ypd YPD -0.1 -0.4 N.D. +0.5 N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.1 +0.1 N.D. -0.1 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +0.5 -0.1 N.D. -0.2 N.D.
facs on lipid accumulation Sorted High BODIPY Gate -0.1 -0.2 N.D. +0.5 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 -0.1 N.D. +0.4 N.D.
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