Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 8984 and 8985 are separated by 1178 nucleotides8985 and 8986 are separated by 218 nucleotides8986 and 8987 are separated by 884 nucleotides8987 and 8988 are separated by 564 nucleotides mRNA_616: 8984 - HMMPfam-Hsp70 protein-PF00012,SUPERFAMILY--SSF100934, at 1,480,593 to 1,481,006 8984 mRNA_617: 8985 - Hypothetical Protein, at 1,482,185 to 1,482,679 8985 mRNA_618: 8986 - HMMPfam-PX domain-PF00787,ProSiteProfiles-PX domain profile.-PS50195,SUPERFAMILY--SSF64268, at 1,482,898 to 1,485,797 8986 mRNA_619: 8987 - K08486 STX1B_2_3 syntaxin 1B/2/3, at 1,486,682 to 1,488,921 8987 mRNA_620: 8988 - K17742 SOU1 sorbose reductase, at 1,489,486 to 1,490,787 8988
Group Condition mRNA_616 mRNA_617 mRNA_618 mRNA_619 mRNA_620
8984 8985 8986 8987 8988
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.1 -0.3 -0.2 +0.2
growth on ypd YPD N.D. -0.3 -0.3 -0.2 +0.6
facs on lipid accumulation Sorted High BODIPY Gate N.D. -0.3 -0.1 +0.4 -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.1 -0.1 +0.0 -0.0
facs on lipid accumulation Sorted No BODIPY Gate N.D. +0.1 +0.1 -0.1 -0.0
ypd buoyancy 40 hrs No Buoyancy Separation N.D. +0.4 -0.2 -0.1 +0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. -0.0 -0.1 +0.2 -0.1
ypd buoyancy 40 hrs Median Buoyancy N.D. -0.1 +0.1 -0.1 +0.3
ypd buoyancy 40 hrs High Buoyancy N.D. +0.2 -0.1 -0.3 +0.6
growth on ricinoleic acid YNB Glucose N.D. +0.0 +0.0 +0.2 +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -0.2 +0.3 -0.1 +0.4
growth on oleic acid YNB Glucose N.D. -0.0 +0.3 +0.2 -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. +0.1 +0.1 +0.2 +0.1
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -0.1 +0.1 +0.4 +0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. +0.0 +0.1 +0.3 +0.3
growth on oleic acid YNB Oleic Acid N.D. +0.4 +0.7 -0.1 +0.0
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -0.1 +0.5 -0.0 +0.6
auxotrophy YNB Glucose 75mM Methionine N.D. +0.5 +0.4 +0.2 +0.1
auxotrophy Dropout Complete N.D. +0.5 +0.2 +0.3 +0.3
auxotrophy YNB Glucose N.D. +0.5 +0.4 +0.2 +0.3
auxotrophy YNB Glucose 75mM Arginine N.D. +0.5 +0.4 +0.4 +0.3
remove
mRNA_616
plot
remove
mRNA_617
plot
remove
mRNA_618
remove
mRNA_619
plot
remove
mRNA_620
plot