Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 8986 and 8987 are separated by 884 nucleotides8987 and 8988 are separated by 564 nucleotides8988 and 8989 are separated by 1423 nucleotides8989 and 8990 are separated by 136 nucleotides mRNA_618: 8986 - HMMPfam-PX domain-PF00787,ProSiteProfiles-PX domain profile.-PS50195,SUPERFAMILY--SSF64268, at 1,482,898 to 1,485,797 8986 mRNA_619: 8987 - K08486 STX1B_2_3 syntaxin 1B/2/3, at 1,486,682 to 1,488,921 8987 mRNA_620: 8988 - K17742 SOU1 sorbose reductase, at 1,489,486 to 1,490,787 8988 mRNA_621: 8989 - K14405 FIP1L1, FIP1 pre-mRNA 3'-end-processing factor FIP1, at 1,492,211 to 1,493,623 8989 mRNA_622: 8990 - K18156 ATP23, XRCC6BP1 mitochondrial inner membrane protease ATP23, at 1,493,760 to 1,494,779 8990
Group Condition mRNA_618 mRNA_619 mRNA_620 mRNA_621 mRNA_622
8986 8987 8988 8989 8990
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 -0.1 +0.0 N.D. N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.3 -0.2 +0.2 N.D. N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.1 -0.1 -0.0 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 +0.0 -0.0 N.D. N.D.
growth on ypd YPD -0.3 -0.2 +0.6 N.D. N.D.
ypd buoyancy 40 hrs High Buoyancy -0.1 -0.3 +0.6 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 +0.2 -0.1 N.D. N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.1 -0.1 +0.3 N.D. N.D.
facs on lipid accumulation Sorted High BODIPY Gate -0.1 +0.4 -0.0 N.D. N.D.
growth on ricinoleic acid YNB Glucose +0.0 +0.2 +0.1 N.D. N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 +0.2 +0.1 N.D. N.D.
growth on oleic acid YNB Glucose +0.3 +0.2 -0.0 N.D. N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid +0.3 -0.1 +0.4 N.D. N.D.
growth on oleic acid YNB Oleic Acid +0.7 -0.1 +0.0 N.D. N.D.
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 +0.4 +0.0 N.D. N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 +0.3 +0.3 N.D. N.D.
auxotrophy YNB Glucose 75mM Methionine +0.4 +0.2 +0.1 N.D. N.D.
auxotrophy Dropout Complete +0.2 +0.3 +0.3 N.D. N.D.
auxotrophy YNB Glucose +0.4 +0.2 +0.3 N.D. N.D.
auxotrophy YNB Glucose 75mM Arginine +0.4 +0.4 +0.3 N.D. N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +0.5 -0.0 +0.6 N.D. N.D.
remove
mRNA_618
plot
remove
mRNA_619
plot
remove
mRNA_620
remove
mRNA_621
plot
remove
mRNA_622
plot