Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 8995 and 8997 are separated by 260 nucleotides8997 and 8996 are separated by 362 nucleotides8996 and 8998 are separated by 944 nucleotides8998 and 8999 are separated by 873 nucleotides mRNA_627: 8995 - HMMPfam-F-box-like-PF12937,SMART-A Receptor for Ubiquitination Targets-SM00256,SUPERFAMILY--SSF81383, at 1,504,190 to 1,505,264 8995 mRNA_629: 8997 - KOG3202 SNARE protein TLG1/Syntaxin 6, at 1,505,525 to 1,506,625 8997 mRNA_628: 8996 - K17894 GATA2 GATA-binding protein 2, at 1,506,988 to 1,510,110 8996 mRNA_630: 8998 - K10088 OS9 protein OS-9, at 1,511,055 to 1,513,202 8998 mRNA_631: 8999 - Hypothetical Protein, at 1,514,076 to 1,515,222 8999
Group Condition mRNA_627 mRNA_629 mRNA_628 mRNA_630 mRNA_631
8995 8997 8996 8998 8999
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. N.D. -2.0 +0.2 -0.3
growth on ricinoleic acid YNB Glucose N.D. N.D. -2.1 +0.5 +0.0
ypd buoyancy 40 hrs Low Buoyancy N.D. N.D. -0.9 -0.1 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. N.D. -0.7 +0.1 -0.3
facs on lipid accumulation Sorted High BODIPY Gate N.D. N.D. -0.9 +0.1 -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. N.D. -0.3 -0.2 -0.2
ypd buoyancy 40 hrs No Buoyancy Separation N.D. N.D. -0.4 -0.5 +0.2
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. N.D. -0.7 +0.2 -0.0
auxotrophy YNB Glucose 75mM Methionine N.D. N.D. -0.9 -0.1 +0.6
ypd buoyancy 40 hrs Median Buoyancy N.D. N.D. +0.2 -0.3 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid N.D. N.D. -0.8 +0.6 +0.0
facs on lipid accumulation Sorted No BODIPY Gate N.D. N.D. -0.4 -0.1 +0.4
auxotrophy YNB Glucose 75mM Arginine N.D. N.D. -0.9 +0.3 +0.5
auxotrophy YNB Glucose N.D. N.D. -0.9 +0.4 +0.6
ypd buoyancy 40 hrs High Buoyancy N.D. N.D. +0.2 -0.1 +0.1
auxotrophy Dropout Complete N.D. N.D. -0.3 +0.1 +0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. N.D. +0.1 +0.3 -0.1
growth on oleic acid YNB Glucose N.D. N.D. -0.5 +0.4 +0.5
growth on ypd YPD N.D. N.D. +0.4 -0.1 +0.2
growth on oleic acid YNB Oleic Acid N.D. N.D. +0.7 +0.3 +0.2
facs on lipid accumulation Sorted Low BODIPY Gate N.D. N.D. +2.5 -0.4 -0.2
remove
mRNA_627
plot
remove
mRNA_629
plot
remove
mRNA_628
remove
mRNA_630
plot
remove
mRNA_631
plot