Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
9000 and 9001 are separated by 272 nucleotides
9001 and 9002 are separated by 94 nucleotides
9002 and 9003 are separated by 3972 nucleotides
9003 and 9004 are separated by 122 nucleotides
mRNA_632: 9000 - K17900 ATG15, AUT5 lipase ATG15, at 1,516,268 to 1,517,647
9000
mRNA_633: 9001 - K14575 AFG2, DRG1, SPATA5 AAA family ATPase, at 1,517,920 to 1,520,918
9001
mRNA_634: 9002 - K18932 ZDHHC palmitoyltransferase, at 1,521,013 to 1,522,610
9002
mRNA_635: 9003 - KOG1470 Phosphatidylinositol transfer protein PDR16 and related proteins, at 1,526,583 to 1,528,432
9003
mRNA_636: 9004 - Hypothetical Protein, at 1,528,555 to 1,529,690
9004
Group
Condition
mRNA
_632
mRNA
_633
mRNA
_634
mRNA
_635
mRNA
_636
9000
9001
9002
9003
9004
facs on lipid accumulation
Sorted No BODIPY Gate
-5.4
N.D.
-0.1
+0.2
-0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
-5.3
N.D.
+0.4
-0.1
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
-3.9
N.D.
+0.1
-0.1
-1.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-1.9
N.D.
-0.2
-1.2
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
-1.3
N.D.
-0.3
-1.1
-0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
-1.0
N.D.
-0.2
-0.7
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-1.5
N.D.
+0.1
-0.8
+0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.7
N.D.
+0.2
-0.9
-0.1
growth on ricinoleic acid
YNB Glucose
-0.1
N.D.
-0.0
-0.9
-0.1
growth on ypd
YPD
+0.4
N.D.
+0.3
-1.0
-0.5
growth on oleic acid
YNB Glucose
+0.3
N.D.
-0.2
-0.6
-0.2
growth on oleic acid
YNB Oleic Acid
-0.5
N.D.
+0.1
-0.4
+0.2
auxotrophy
Dropout Complete
+0.1
N.D.
+0.2
-1.1
+0.3
ypd buoyancy
40 hrs Low Buoyancy
-0.2
N.D.
-0.1
-0.4
+0.4
auxotrophy
YNB Glucose 75mM Methionine
+0.3
N.D.
-0.1
-0.8
+0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.0
N.D.
+0.1
-0.4
+0.1
ypd buoyancy
40 hrs Median Buoyancy
+0.0
N.D.
+0.1
-0.5
+0.2
auxotrophy
YNB Glucose 75mM Arginine
+0.2
N.D.
+0.0
-0.9
+0.6
ypd buoyancy
40 hrs No Buoyancy Separation
-0.5
N.D.
-0.1
+0.6
+0.1
auxotrophy
YNB Glucose
+0.1
N.D.
+0.1
-1.0
+1.0
ypd buoyancy
40 hrs High Buoyancy
+0.1
N.D.
+0.1
-0.4
+0.5
remove
mRNA_632
plot
remove
mRNA_633
plot
remove
mRNA_634
remove
mRNA_635
plot
remove
mRNA_636
plot