Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 9002 and 9003 are separated by 3972 nucleotides9003 and 9004 are separated by 122 nucleotides9004 and 9005 are separated by 108 nucleotides9005 and 9006 are separated by 470 nucleotides mRNA_634: 9002 - K18932 ZDHHC palmitoyltransferase, at 1,521,013 to 1,522,610 9002 mRNA_635: 9003 - KOG1470 Phosphatidylinositol transfer protein PDR16 and related proteins, at 1,526,583 to 1,528,432 9003 mRNA_636: 9004 - Hypothetical Protein, at 1,528,555 to 1,529,690 9004 mRNA_637: 9005 - K02516 PRMT5, HSL7 type II protein arginine methyltransferase, at 1,529,799 to 1,532,897 9005 mRNA_638: 9006 - K02947 RP-S10e, RPS10 small subunit ribosomal protein S10e, at 1,533,368 to 1,534,142 9006
Group Condition mRNA_634 mRNA_635 mRNA_636 mRNA_637 mRNA_638
9002 9003 9004 9005 9006
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 -1.2 -0.1 N.D. N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 -1.1 -0.1 N.D. N.D.
growth on ypd YPD +0.3 -1.0 -0.5 N.D. N.D.
facs on lipid accumulation Sorted High BODIPY Gate +0.1 -0.1 -1.3 N.D. N.D.
growth on ricinoleic acid YNB Glucose -0.0 -0.9 -0.1 N.D. N.D.
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 -0.7 -0.1 N.D. N.D.
growth on oleic acid YNB Glucose -0.2 -0.6 -0.2 N.D. N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 -0.9 -0.1 N.D. N.D.
auxotrophy YNB Glucose 75mM Methionine -0.1 -0.8 +0.3 N.D. N.D.
auxotrophy Dropout Complete +0.2 -1.1 +0.3 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 -0.8 +0.3 N.D. N.D.
auxotrophy YNB Glucose 75mM Arginine +0.0 -0.9 +0.6 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 -0.4 +0.1 N.D. N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.1 -0.5 +0.2 N.D. N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.1 -0.4 +0.4 N.D. N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.1 +0.2 -0.2 N.D. N.D.
growth on oleic acid YNB Oleic Acid +0.1 -0.4 +0.2 N.D. N.D.
auxotrophy YNB Glucose +0.1 -1.0 +1.0 N.D. N.D.
facs on lipid accumulation Sorted Low BODIPY Gate +0.4 -0.1 -0.1 N.D. N.D.
ypd buoyancy 40 hrs High Buoyancy +0.1 -0.4 +0.5 N.D. N.D.
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 +0.6 +0.1 N.D. N.D.
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