Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 9003 and 9004 are separated by 122 nucleotides9004 and 9005 are separated by 108 nucleotides9005 and 9006 are separated by 470 nucleotides9006 and 9007 are separated by 794 nucleotides mRNA_635: 9003 - KOG1470 Phosphatidylinositol transfer protein PDR16 and related proteins, at 1,526,583 to 1,528,432 9003 mRNA_636: 9004 - Hypothetical Protein, at 1,528,555 to 1,529,690 9004 mRNA_637: 9005 - K02516 PRMT5, HSL7 type II protein arginine methyltransferase, at 1,529,799 to 1,532,897 9005 mRNA_638: 9006 - K02947 RP-S10e, RPS10 small subunit ribosomal protein S10e, at 1,533,368 to 1,534,142 9006 mRNA_639: 9007 - K18027 PTPN3, PTPH1 tyrosine-protein phosphatase non-receptor type 3, at 1,534,937 to 1,536,294 9007
Group Condition mRNA_635 mRNA_636 mRNA_637 mRNA_638 mRNA_639
9003 9004 9005 9006 9007
growth on ricinoleic acid YNB Methylricinoleic Acid -1.1 -0.1 N.D. N.D. -0.2
growth on ypd YPD -1.0 -0.5 N.D. N.D. +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -1.2 -0.1 N.D. N.D. +0.2
facs on lipid accumulation Sorted High BODIPY Gate -0.1 -1.3 N.D. N.D. +0.2
growth on ricinoleic acid YNB Glucose -0.9 -0.1 N.D. N.D. -0.0
growth on ricinoleic acid YNB Ricinoleic Acid -0.7 -0.1 N.D. N.D. -0.2
auxotrophy Dropout Complete -1.1 +0.3 N.D. N.D. -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.9 -0.1 N.D. N.D. +0.2
growth on oleic acid YNB Glucose -0.6 -0.2 N.D. N.D. -0.0
auxotrophy YNB Glucose 75mM Methionine -0.8 +0.3 N.D. N.D. -0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.4 +0.1 N.D. N.D. -0.2
auxotrophy YNB Glucose 75mM Arginine -0.9 +0.6 N.D. N.D. -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.8 +0.3 N.D. N.D. +0.3
ypd buoyancy 40 hrs Median Buoyancy -0.5 +0.2 N.D. N.D. +0.1
growth on oleic acid YNB Oleic Acid -0.4 +0.2 N.D. N.D. -0.0
auxotrophy YNB Glucose -1.0 +1.0 N.D. N.D. -0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 -0.1 N.D. N.D. +0.3
ypd buoyancy 40 hrs Low Buoyancy -0.4 +0.4 N.D. N.D. +0.1
ypd buoyancy 40 hrs High Buoyancy -0.4 +0.5 N.D. N.D. -0.0
facs on lipid accumulation Sorted No BODIPY Gate +0.2 -0.2 N.D. N.D. +0.3
ypd buoyancy 40 hrs No Buoyancy Separation +0.6 +0.1 N.D. N.D. -0.0
remove
mRNA_635
plot		 remove
mRNA_636
plot		 remove
mRNA_637		 remove
mRNA_638
plot		 remove
mRNA_639
plot