Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 9005 and 9006 are separated by 470 nucleotides9006 and 9007 are separated by 794 nucleotides9007 and 9008 are separated by 181 nucleotides9008 and 9009 are separated by 122 nucleotides mRNA_637: 9005 - K02516 PRMT5, HSL7 type II protein arginine methyltransferase, at 1,529,799 to 1,532,897 9005 mRNA_638: 9006 - K02947 RP-S10e, RPS10 small subunit ribosomal protein S10e, at 1,533,368 to 1,534,142 9006 mRNA_639: 9007 - K18027 PTPN3, PTPH1 tyrosine-protein phosphatase non-receptor type 3, at 1,534,937 to 1,536,294 9007 mRNA_640: 9008 - HMMPfam-UV radiation resistance protein and autophagy-related subunit 14-PF10186, at 1,536,476 to 1,538,269 9008 mRNA_641: 9009 - K08333 PIK3R4, VPS15 phosphoinositide-3-kinase, regulatory subunit 4, at 1,538,392 to 1,544,328 9009
Group Condition mRNA_637 mRNA_638 mRNA_639 mRNA_640 mRNA_641
9005 9006 9007 9008 9009
facs on lipid accumulation Sorted High BODIPY Gate N.D. N.D. +0.2 -4.0 -0.0
facs on lipid accumulation Sorted No BODIPY Gate N.D. N.D. +0.3 -2.0 -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. N.D. +0.2 -1.4 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. N.D. +0.3 -0.5 -0.5
growth on ypd YPD N.D. N.D. +0.1 -0.9 +0.3
auxotrophy YNB Glucose 75mM Methionine N.D. N.D. -0.0 -0.7 +0.2
auxotrophy Dropout Complete N.D. N.D. -0.1 -0.4 +0.1
auxotrophy YNB Glucose 75mM Arginine N.D. N.D. -0.1 -0.3 +0.2
auxotrophy YNB Glucose N.D. N.D. -0.1 -0.3 +0.2
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. N.D. -0.2 +0.3 -0.1
ypd buoyancy 40 hrs High Buoyancy N.D. N.D. -0.0 +0.0 +0.3
ypd buoyancy 40 hrs No Buoyancy Separation N.D. N.D. -0.0 +0.5 -0.1
growth on oleic acid YNB Glucose N.D. N.D. -0.0 +0.2 +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. N.D. -0.2 +0.7 -0.0
facs on lipid accumulation Sorted Low BODIPY Gate N.D. N.D. +0.3 +1.0 -0.7
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. N.D. +0.2 +0.7 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid N.D. N.D. -0.2 +0.7 +0.3
growth on oleic acid YNB Oleic Acid N.D. N.D. -0.0 +0.3 +0.6
growth on ricinoleic acid YNB Glucose N.D. N.D. -0.0 +0.6 +0.3
ypd buoyancy 40 hrs Median Buoyancy N.D. N.D. +0.1 +0.5 +0.4
ypd buoyancy 40 hrs Low Buoyancy N.D. N.D. +0.1 +0.8 +0.1
remove
mRNA_637
plot
remove
mRNA_638
plot
remove
mRNA_639
remove
mRNA_640
plot
remove
mRNA_641
plot