Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 9006 and 9007 are separated by 794 nucleotides9007 and 9008 are separated by 181 nucleotides9008 and 9009 are separated by 122 nucleotides9009 and 9010 are separated by 338 nucleotides mRNA_638: 9006 - K02947 RP-S10e, RPS10 small subunit ribosomal protein S10e, at 1,533,368 to 1,534,142 9006 mRNA_639: 9007 - K18027 PTPN3, PTPH1 tyrosine-protein phosphatase non-receptor type 3, at 1,534,937 to 1,536,294 9007 mRNA_640: 9008 - HMMPfam-UV radiation resistance protein and autophagy-related subunit 14-PF10186, at 1,536,476 to 1,538,269 9008 mRNA_641: 9009 - K08333 PIK3R4, VPS15 phosphoinositide-3-kinase, regulatory subunit 4, at 1,538,392 to 1,544,328 9009 mRNA_642: 9010 - HMMPfam-Basic region leucine zipper-PF07716,ProSitePatterns-Basic-leucine zipper (bZIP) domain signature.-PS00036,ProSiteProfiles-Basic-leucine zipper (bZIP) domain profile.-PS50217,SMART-basic region leucin zipper-SM00338,SUPERFAMILY--SSF57959, at 1,544,667 to 1,546,033 9010
Group Condition mRNA_638 mRNA_639 mRNA_640 mRNA_641 mRNA_642
9006 9007 9008 9009 9010
facs on lipid accumulation Sorted High BODIPY Gate N.D. +0.2 -4.0 -0.0 N.D.
facs on lipid accumulation Sorted No BODIPY Gate N.D. +0.3 -2.0 -0.3 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. +0.2 -1.4 -0.3 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.3 -0.5 -0.5 N.D.
growth on ypd YPD N.D. +0.1 -0.9 +0.3 N.D.
auxotrophy YNB Glucose 75mM Methionine N.D. -0.0 -0.7 +0.2 N.D.
auxotrophy Dropout Complete N.D. -0.1 -0.4 +0.1 N.D.
auxotrophy YNB Glucose 75mM Arginine N.D. -0.1 -0.3 +0.2 N.D.
auxotrophy YNB Glucose N.D. -0.1 -0.3 +0.2 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -0.2 +0.3 -0.1 N.D.
ypd buoyancy 40 hrs High Buoyancy N.D. -0.0 +0.0 +0.3 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -0.0 +0.5 -0.1 N.D.
growth on oleic acid YNB Glucose N.D. -0.0 +0.2 +0.2 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. -0.2 +0.7 -0.0 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate N.D. +0.3 +1.0 -0.7 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. +0.2 +0.7 -0.1 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -0.2 +0.7 +0.3 N.D.
growth on oleic acid YNB Oleic Acid N.D. -0.0 +0.3 +0.6 N.D.
growth on ricinoleic acid YNB Glucose N.D. -0.0 +0.6 +0.3 N.D.
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.1 +0.5 +0.4 N.D.
ypd buoyancy 40 hrs Low Buoyancy N.D. +0.1 +0.8 +0.1 N.D.
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