Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 9015 and 9016 are separated by 286 nucleotides9016 and 9017 are separated by 168 nucleotides9017 and 9018 are separated by 191 nucleotides9018 and 9019 are separated by 155 nucleotides mRNA_647: 9015 - K09885 AQPF aquaporin rerated protein, other eukaryote, at 1,555,645 to 1,557,271 9015 mRNA_648: 9016 - K03424 tatD TatD DNase family protein, at 1,557,558 to 1,558,767 9016 mRNA_649: 9017 - K15192 BTAF1, MOT1 TATA-binding protein-associated factor, at 1,558,936 to 1,565,576 9017 mRNA_650: 9018 - KOG0603 Ribosomal protein S6 kinase, at 1,565,768 to 1,568,049 9018 mRNA_651: 9019 - Hypothetical Protein, at 1,568,205 to 1,569,102 9019
Group Condition mRNA_647 mRNA_648 mRNA_649 mRNA_650 mRNA_651
9015 9016 9017 9018 9019
ypd buoyancy 40 hrs No Buoyancy Separation -0.8 -0.3 N.D. -0.2 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 -0.2 N.D. -0.4 N.D.
auxotrophy YNB Glucose 75mM Methionine -0.5 -0.0 N.D. -0.1 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 -0.2 N.D. -0.4 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 +0.2 N.D. -0.4 N.D.
auxotrophy YNB Glucose 75mM Arginine -0.3 +0.1 N.D. -0.2 N.D.
ypd buoyancy 40 hrs Low Buoyancy +0.0 -0.2 N.D. +0.0 N.D.
growth on ypd YPD -0.2 +0.2 N.D. -0.2 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 +0.1 N.D. +0.1 N.D.
facs on lipid accumulation Sorted High BODIPY Gate +0.6 -0.4 N.D. -0.2 N.D.
growth on ricinoleic acid YNB Glucose -0.0 +0.6 N.D. -0.6 N.D.
auxotrophy Dropout Complete -0.0 +0.4 N.D. -0.3 N.D.
auxotrophy YNB Glucose -0.2 +0.5 N.D. -0.2 N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.1 +0.2 N.D. +0.0 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.3 +0.1 N.D. -0.0 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate +0.2 -0.1 N.D. +0.1 N.D.
growth on oleic acid YNB Oleic Acid +0.5 +0.0 N.D. -0.2 N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.7 -0.4 N.D. +0.0 N.D.
growth on oleic acid YNB Glucose +0.7 +0.3 N.D. -0.4 N.D.
ypd buoyancy 40 hrs High Buoyancy +0.2 +0.1 N.D. +0.3 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.4 +0.1 N.D. +0.2 N.D.
remove
mRNA_647
plot		 remove
mRNA_648
plot		 remove
mRNA_649		 remove
mRNA_650
plot		 remove
mRNA_651
plot