Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
9021 and 9022 are separated by 508 nucleotides
9022 and 9023 are separated by 283 nucleotides
9023 and 9024 are separated by 1140 nucleotides
9024 and 9025 are separated by 1115 nucleotides
mRNA_653: 9021 - HMMPfam-RTA1 like protein-PF04479, at 1,571,518 to 1,572,791
9021
mRNA_654: 9022 - K14809 DDX55, SPB4 ATP-dependent RNA helicase DDX55/SPB4, at 1,573,300 to 1,575,930
9022
mRNA_655: 9023 - K11246 SHO1 SHO1 osmosensor, at 1,576,214 to 1,578,020
9023
mRNA_656: 9024 - Hypothetical Protein, at 1,579,161 to 1,580,144
9024
mRNA_657: 9025 - Hypothetical Protein, at 1,581,260 to 1,582,108
9025
Group
Condition
mRNA
_653
mRNA
_654
mRNA
_655
mRNA
_656
mRNA
_657
9021
9022
9023
9024
9025
ypd buoyancy
40 hrs No Buoyancy Separation
+0.7
N.D.
-0.8
+0.2
-1.3
ypd buoyancy
40 hrs Median Buoyancy
-0.6
N.D.
-0.2
+0.2
-0.1
ypd buoyancy
40 hrs High Buoyancy
-0.5
N.D.
-0.2
+0.2
-0.1
ypd buoyancy
40 hrs Low Buoyancy
+0.0
N.D.
-0.7
+0.1
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.3
N.D.
+0.1
+0.2
-0.9
growth on ricinoleic acid
YNB Glucose
+0.0
N.D.
+0.1
+0.1
-0.4
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.2
N.D.
-0.3
+0.2
-0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.2
N.D.
+0.1
+0.4
-0.8
growth on oleic acid
YNB Glucose
+0.3
N.D.
-0.3
+0.1
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
+0.0
N.D.
+0.2
-0.4
+0.3
growth on ypd
YPD
-0.1
N.D.
+0.1
-0.3
+0.4
auxotrophy
YNB Glucose
+0.3
N.D.
+0.0
+0.1
-0.4
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.1
N.D.
-0.0
-0.1
+0.5
auxotrophy
YNB Glucose 75mM Methionine
+0.1
N.D.
-0.2
+0.1
+0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.1
N.D.
-0.1
-0.1
+0.9
auxotrophy
YNB Glucose 75mM Arginine
+0.2
N.D.
-0.0
-0.0
+0.6
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.6
N.D.
+0.1
+0.3
-0.3
growth on oleic acid
YNB Oleic Acid
-0.0
N.D.
+0.6
+0.1
+0.2
auxotrophy
Dropout Complete
+0.6
N.D.
-0.1
+0.1
+0.4
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.2
N.D.
+0.1
+0.5
+0.2
facs on lipid accumulation
Sorted High BODIPY Gate
+0.2
N.D.
+0.0
+0.2
+0.8
remove
mRNA_653
plot
remove
mRNA_654
plot
remove
mRNA_655
remove
mRNA_656
plot
remove
mRNA_657
plot