Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 9021 and 9022 are separated by 508 nucleotides9022 and 9023 are separated by 283 nucleotides9023 and 9024 are separated by 1140 nucleotides9024 and 9025 are separated by 1115 nucleotides mRNA_653: 9021 - HMMPfam-RTA1 like protein-PF04479, at 1,571,518 to 1,572,791 9021 mRNA_654: 9022 - K14809 DDX55, SPB4 ATP-dependent RNA helicase DDX55/SPB4, at 1,573,300 to 1,575,930 9022 mRNA_655: 9023 - K11246 SHO1 SHO1 osmosensor, at 1,576,214 to 1,578,020 9023 mRNA_656: 9024 - Hypothetical Protein, at 1,579,161 to 1,580,144 9024 mRNA_657: 9025 - Hypothetical Protein, at 1,581,260 to 1,582,108 9025
Group Condition mRNA_653 mRNA_654 mRNA_655 mRNA_656 mRNA_657
9021 9022 9023 9024 9025
ypd buoyancy 40 hrs No Buoyancy Separation +0.7 N.D. -0.8 +0.2 -1.3
ypd buoyancy 40 hrs Median Buoyancy -0.6 N.D. -0.2 +0.2 -0.1
ypd buoyancy 40 hrs High Buoyancy -0.5 N.D. -0.2 +0.2 -0.1
ypd buoyancy 40 hrs Low Buoyancy +0.0 N.D. -0.7 +0.1 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.3 N.D. +0.1 +0.2 -0.9
growth on ricinoleic acid YNB Glucose +0.0 N.D. +0.1 +0.1 -0.4
growth on ricinoleic acid YNB Methylricinoleic Acid +0.2 N.D. -0.3 +0.2 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.2 N.D. +0.1 +0.4 -0.8
growth on oleic acid YNB Glucose +0.3 N.D. -0.3 +0.1 -0.1
facs on lipid accumulation Sorted No BODIPY Gate +0.0 N.D. +0.2 -0.4 +0.3
growth on ypd YPD -0.1 N.D. +0.1 -0.3 +0.4
auxotrophy YNB Glucose +0.3 N.D. +0.0 +0.1 -0.4
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 N.D. -0.0 -0.1 +0.5
auxotrophy YNB Glucose 75mM Methionine +0.1 N.D. -0.2 +0.1 +0.3
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 N.D. -0.1 -0.1 +0.9
auxotrophy YNB Glucose 75mM Arginine +0.2 N.D. -0.0 -0.0 +0.6
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.6 N.D. +0.1 +0.3 -0.3
growth on oleic acid YNB Oleic Acid -0.0 N.D. +0.6 +0.1 +0.2
auxotrophy Dropout Complete +0.6 N.D. -0.1 +0.1 +0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 N.D. +0.1 +0.5 +0.2
facs on lipid accumulation Sorted High BODIPY Gate +0.2 N.D. +0.0 +0.2 +0.8
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