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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
9023 and 9024 are separated by 1140 nucleotides
9024 and 9025 are separated by 1115 nucleotides
9025 and 9026 are separated by 258 nucleotides
9026 and 9027 are separated by 687 nucleotides
mRNA_655: 9023 - K11246 SHO1 SHO1 osmosensor, at 1,576,214 to 1,578,020
9023
mRNA_656: 9024 - Hypothetical Protein, at 1,579,161 to 1,580,144
9024
mRNA_657: 9025 - Hypothetical Protein, at 1,581,260 to 1,582,108
9025
mRNA_658: 9026 - K11842 USP12_46 ubiquitin carboxyl-terminal hydrolase 12/46, at 1,582,367 to 1,585,803
9026
mRNA_659: 9027 - Hypothetical Protein, at 1,586,491 to 1,589,993
9027
Group
Condition
mRNA
_655
mRNA
_656
mRNA
_657
mRNA
_658
mRNA
_659
9023
9024
9025
9026
9027
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.1
+0.2
-0.9
-2.0
-0.3
ypd buoyancy
40 hrs No Buoyancy Separation
-0.8
+0.2
-1.3
-0.4
-0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.1
+0.4
-0.8
-1.1
+0.1
ypd buoyancy
40 hrs Low Buoyancy
-0.7
+0.1
-0.1
-0.1
-0.2
ypd buoyancy
40 hrs Median Buoyancy
-0.2
+0.2
-0.1
-0.2
-0.3
growth on ricinoleic acid
YNB Glucose
+0.1
+0.1
-0.4
-0.5
+0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.3
+0.2
-0.2
+0.0
+0.1
ypd buoyancy
40 hrs High Buoyancy
-0.2
+0.2
-0.1
-0.1
-0.0
auxotrophy
YNB Glucose
+0.0
+0.1
-0.4
-0.3
+0.4
growth on oleic acid
YNB Glucose
-0.3
+0.1
-0.1
-0.1
+0.3
auxotrophy
YNB Glucose 75mM Methionine
-0.2
+0.1
+0.3
-0.5
+0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.1
+0.3
-0.3
-0.5
+0.3
auxotrophy
Dropout Complete
-0.1
+0.1
+0.4
-0.5
+0.3
auxotrophy
YNB Glucose 75mM Arginine
-0.0
-0.0
+0.6
-0.6
+0.3
facs on lipid accumulation
Sorted No BODIPY Gate
+0.2
-0.4
+0.3
+0.2
-0.0
growth on ypd
YPD
+0.1
-0.3
+0.4
-0.2
+0.4
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.0
-0.1
+0.5
+0.5
+0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.1
+0.5
+0.2
+0.3
+0.1
growth on oleic acid
YNB Oleic Acid
+0.6
+0.1
+0.2
+0.5
+0.1
facs on lipid accumulation
Sorted High BODIPY Gate
+0.0
+0.2
+0.8
+1.0
+0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.1
-0.1
+0.9
+1.8
+0.2
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