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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
9024 and 9025 are separated by 1115 nucleotides
9025 and 9026 are separated by 258 nucleotides
9026 and 9027 are separated by 687 nucleotides
9027 and 9028 are separated by 134 nucleotides
mRNA_656: 9024 - Hypothetical Protein, at 1,579,161 to 1,580,144
9024
mRNA_657: 9025 - Hypothetical Protein, at 1,581,260 to 1,582,108
9025
mRNA_658: 9026 - K11842 USP12_46 ubiquitin carboxyl-terminal hydrolase 12/46, at 1,582,367 to 1,585,803
9026
mRNA_659: 9027 - Hypothetical Protein, at 1,586,491 to 1,589,993
9027
mRNA_660: 9028 - K13289 CTSA, CPY cathepsin A (carboxypeptidase C), at 1,590,128 to 1,592,290
9028
Group
Condition
mRNA
_656
mRNA
_657
mRNA
_658
mRNA
_659
mRNA
_660
9024
9025
9026
9027
9028
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.2
-0.9
-2.0
-0.3
-0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.4
-0.8
-1.1
+0.1
+0.3
ypd buoyancy
40 hrs No Buoyancy Separation
+0.2
-1.3
-0.4
-0.3
+0.9
growth on ricinoleic acid
YNB Glucose
+0.1
-0.4
-0.5
+0.2
-0.2
facs on lipid accumulation
Sorted No BODIPY Gate
-0.4
+0.3
+0.2
-0.0
-0.4
auxotrophy
YNB Glucose
+0.1
-0.4
-0.3
+0.4
+0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.2
-0.2
+0.0
+0.1
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.3
-0.3
-0.5
+0.3
+0.1
ypd buoyancy
40 hrs Low Buoyancy
+0.1
-0.1
-0.1
-0.2
+0.4
auxotrophy
Dropout Complete
+0.1
+0.4
-0.5
+0.3
-0.1
growth on ypd
YPD
-0.3
+0.4
-0.2
+0.4
-0.1
growth on oleic acid
YNB Glucose
+0.1
-0.1
-0.1
+0.3
+0.1
ypd buoyancy
40 hrs Median Buoyancy
+0.2
-0.1
-0.2
-0.3
+0.7
auxotrophy
YNB Glucose 75mM Arginine
-0.0
+0.6
-0.6
+0.3
+0.2
auxotrophy
YNB Glucose 75mM Methionine
+0.1
+0.3
-0.5
+0.3
+0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.5
+0.2
+0.3
+0.1
-0.6
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.1
+0.5
+0.5
+0.3
-0.5
ypd buoyancy
40 hrs High Buoyancy
+0.2
-0.1
-0.1
-0.0
+0.8
growth on oleic acid
YNB Oleic Acid
+0.1
+0.2
+0.5
+0.1
+0.4
facs on lipid accumulation
Sorted High BODIPY Gate
+0.2
+0.8
+1.0
+0.2
-0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.1
+0.9
+1.8
+0.2
-0.1
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