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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
9027 and 9028 are separated by 134 nucleotides
9028 and 9029 are separated by 754 nucleotides
9029 and 9030 are separated by 352 nucleotides
9030 and 9031 are separated by 338 nucleotides
mRNA_659: 9027 - Hypothetical Protein, at 1,586,491 to 1,589,993
9027
mRNA_660: 9028 - K13289 CTSA, CPY cathepsin A (carboxypeptidase C), at 1,590,128 to 1,592,290
9028
mRNA_661: 9029 - Hypothetical Protein, at 1,593,045 to 1,593,501
9029
mRNA_662: 9030 - HMMPfam-EF-hand domain pair-PF13499,ProSitePatterns-EF-hand calcium-binding domain.-PS00018,ProSiteProfiles-EF-hand calcium-binding domain profile.-PS50222,SUPERFAMILY--SSF47473, at 1,593,854 to 1,595,354
9030
mRNA_663: 9031 - SUPERFAMILY--SSF103196, at 1,595,693 to 1,596,287
9031
Group
Condition
mRNA
_659
mRNA
_660
mRNA
_661
mRNA
_662
mRNA
_663
9027
9028
9029
9030
9031
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.3
-0.2
+0.2
-0.2
N.D.
facs on lipid accumulation
Sorted No BODIPY Gate
-0.0
-0.4
+0.2
+0.0
N.D.
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.1
-0.6
+0.2
+0.2
N.D.
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.2
-0.1
+0.0
+0.0
N.D.
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.3
-0.5
+0.1
+0.4
N.D.
growth on ypd
YPD
+0.4
-0.1
-0.0
+0.2
N.D.
ypd buoyancy
40 hrs No Buoyancy Separation
-0.3
+0.9
+0.0
+0.0
N.D.
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.1
-0.1
+0.1
+0.5
N.D.
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.1
+0.3
+0.2
-0.0
N.D.
growth on ricinoleic acid
YNB Glucose
+0.2
-0.2
+0.1
+0.5
N.D.
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.3
+0.1
-0.2
+0.3
N.D.
auxotrophy
Dropout Complete
+0.3
-0.1
+0.1
+0.4
N.D.
ypd buoyancy
40 hrs Low Buoyancy
-0.2
+0.4
-0.1
+0.6
N.D.
facs on lipid accumulation
Sorted High BODIPY Gate
+0.2
-0.2
+0.3
+0.5
N.D.
auxotrophy
YNB Glucose 75mM Arginine
+0.3
+0.2
+0.1
+0.2
N.D.
ypd buoyancy
40 hrs Median Buoyancy
-0.3
+0.7
-0.0
+0.4
N.D.
growth on oleic acid
YNB Glucose
+0.3
+0.1
+0.3
+0.2
N.D.
growth on oleic acid
YNB Oleic Acid
+0.1
+0.4
+0.2
+0.3
N.D.
auxotrophy
YNB Glucose 75mM Methionine
+0.3
+0.3
-0.0
+0.5
N.D.
auxotrophy
YNB Glucose
+0.4
+0.1
+0.1
+0.6
N.D.
ypd buoyancy
40 hrs High Buoyancy
-0.0
+0.8
-0.1
+0.6
N.D.
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