Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 9028 and 9029 are separated by 754 nucleotides9029 and 9030 are separated by 352 nucleotides9030 and 9031 are separated by 338 nucleotides9031 and 9032 are separated by 363 nucleotides mRNA_660: 9028 - K13289 CTSA, CPY cathepsin A (carboxypeptidase C), at 1,590,128 to 1,592,290 9028 mRNA_661: 9029 - Hypothetical Protein, at 1,593,045 to 1,593,501 9029 mRNA_662: 9030 - HMMPfam-EF-hand domain pair-PF13499,ProSitePatterns-EF-hand calcium-binding domain.-PS00018,ProSiteProfiles-EF-hand calcium-binding domain profile.-PS50222,SUPERFAMILY--SSF47473, at 1,593,854 to 1,595,354 9030 mRNA_663: 9031 - SUPERFAMILY--SSF103196, at 1,595,693 to 1,596,287 9031 mRNA_664: 9032 - HMMPfam-2OG-Fe(II) oxygenase superfamily-PF13532,SUPERFAMILY--SSF51197, at 1,596,651 to 1,602,461 9032
Group Condition mRNA_660 mRNA_661 mRNA_662 mRNA_663 mRNA_664
9028 9029 9030 9031 9032
facs on lipid accumulation Sorted No BODIPY Gate -0.4 +0.2 +0.0 N.D. -0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 +0.0 +0.0 N.D. -0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.6 +0.2 +0.2 N.D. -0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 +0.2 -0.2 N.D. +0.1
auxotrophy Dropout Complete -0.1 +0.1 +0.4 N.D. -0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.2 +0.3 +0.5 N.D. -0.4
growth on ypd YPD -0.1 -0.0 +0.2 N.D. +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 -0.2 +0.3 N.D. -0.0
growth on ricinoleic acid YNB Ricinoleic Acid -0.5 +0.1 +0.4 N.D. +0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.3 +0.2 -0.0 N.D. -0.1
growth on ricinoleic acid YNB Glucose -0.2 +0.1 +0.5 N.D. -0.0
auxotrophy YNB Glucose 75mM Arginine +0.2 +0.1 +0.2 N.D. +0.0
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 +0.1 +0.5 N.D. +0.1
ypd buoyancy 40 hrs No Buoyancy Separation +0.9 +0.0 +0.0 N.D. -0.2
growth on oleic acid YNB Glucose +0.1 +0.3 +0.2 N.D. +0.1
auxotrophy YNB Glucose 75mM Methionine +0.3 -0.0 +0.5 N.D. +0.0
auxotrophy YNB Glucose +0.1 +0.1 +0.6 N.D. +0.1
ypd buoyancy 40 hrs Low Buoyancy +0.4 -0.1 +0.6 N.D. +0.0
growth on oleic acid YNB Oleic Acid +0.4 +0.2 +0.3 N.D. -0.0
ypd buoyancy 40 hrs High Buoyancy +0.8 -0.1 +0.6 N.D. -0.1
ypd buoyancy 40 hrs Median Buoyancy +0.7 -0.0 +0.4 N.D. +0.0
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