Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
9033 and 9034 are separated by 60 nucleotides
9034 and 9035 are separated by 111 nucleotides
9035 and 9036 are separated by 277 nucleotides
9036 and 9037 are separated by 667 nucleotides
mRNA_665: 9033 - K08853 AAK AP2-associated kinase, at 1,602,722 to 1,607,021
9033
mRNA_666: 9034 - ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SUPERFAMILY--SSF57701, at 1,607,082 to 1,608,088
9034
mRNA_667: 9035 - Interpro Ribosome associated membrane protein RAMP4, at 1,608,200 to 1,608,918
9035
mRNA_668: 9036 - HMMPfam-F-box-like-PF12937,SUPERFAMILY--SSF52047, at 1,609,196 to 1,610,811
9036
mRNA_669: 9037 - K01689 ENO, eno enolase, at 1,611,479 to 1,614,227
9037
Group
Condition
mRNA
_665
mRNA
_666
mRNA
_667
mRNA
_668
mRNA
_669
9033
9034
9035
9036
9037
auxotrophy
Dropout Complete
-1.0
-1.1
-0.3
-0.1
N.D.
auxotrophy
YNB Glucose 75mM Methionine
-1.2
-0.4
-0.7
+0.0
N.D.
auxotrophy
YNB Glucose
-1.1
-0.5
-0.6
+0.1
N.D.
auxotrophy
YNB Glucose 75mM Arginine
-0.9
-0.7
-0.3
-0.1
N.D.
facs on lipid accumulation
Sorted Low BODIPY Gate
-2.0
+0.5
-0.8
+0.5
N.D.
facs on lipid accumulation
Sorted High BODIPY Gate
-0.8
-0.8
-0.3
+0.2
N.D.
growth on oleic acid
YNB Glucose
-0.8
+0.0
-0.9
+0.2
N.D.
facs on lipid accumulation
Sorted No BODIPY Gate
-1.3
+0.1
-0.0
+0.3
N.D.
growth on oleic acid
YNB Oleic Acid
-0.5
+0.2
-0.4
-0.1
N.D.
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.4
-0.5
+0.0
+0.1
N.D.
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.8
+0.3
-0.2
+0.1
N.D.
growth on ricinoleic acid
YNB Glucose
-0.9
+0.3
+0.0
-0.1
N.D.
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.5
+0.3
-0.2
+0.1
N.D.
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.8
-0.1
+0.3
+0.3
N.D.
ypd buoyancy
40 hrs No Buoyancy Separation
-1.0
+0.9
+0.3
-0.4
N.D.
growth on ypd
YPD
-0.3
+0.1
-0.2
+0.2
N.D.
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
-0.1
-0.1
+0.2
N.D.
ypd buoyancy
40 hrs High Buoyancy
-0.0
+0.2
+0.2
-0.0
N.D.
ypd buoyancy
40 hrs Median Buoyancy
+0.0
+0.2
+0.5
-0.1
N.D.
ypd buoyancy
40 hrs Low Buoyancy
-0.1
+0.1
+0.5
+0.1
N.D.
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.1
+0.1
+0.2
+0.3
N.D.
remove
mRNA_665
plot
remove
mRNA_666
plot
remove
mRNA_667
remove
mRNA_668
plot
remove
mRNA_669
plot