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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
9042 and 9043 are separated by 504 nucleotides
9043 and 9044 are separated by 24 nucleotides
9044 and 9045 are separated by 91 nucleotides
9045 and 9046 are separated by 193 nucleotides
mRNA_674: 9042 - K04382 PPP2C serine/threonine-protein phosphatase 2A catalytic subunit, at 1,623,142 to 1,624,836
9042
mRNA_675: 9043 - BLAST expressed protein [Cryptococcus neoformans var. neofo..., at 1,625,341 to 1,626,264
9043
mRNA_676: 9044 - Hypothetical Protein, at 1,626,289 to 1,626,986
9044
mRNA_677: 9045 - Hypothetical Protein, at 1,627,078 to 1,627,551
9045
mRNA_678: 9046 - Hypothetical Protein, at 1,627,745 to 1,628,960
9046
Group
Condition
mRNA
_674
mRNA
_675
mRNA
_676
mRNA
_677
mRNA
_678
9042
9043
9044
9045
9046
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
-0.9
N.D.
N.D.
+0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
-0.2
N.D.
N.D.
-0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
-0.5
N.D.
N.D.
-0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
-0.3
N.D.
N.D.
+0.0
auxotrophy
YNB Glucose 75mM Arginine
N.D.
-0.5
N.D.
N.D.
+0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
+0.1
N.D.
N.D.
-0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
-0.0
N.D.
N.D.
-0.2
growth on ypd
YPD
N.D.
-0.3
N.D.
N.D.
+0.2
auxotrophy
YNB Glucose
N.D.
-0.3
N.D.
N.D.
+0.3
auxotrophy
YNB Glucose 75mM Methionine
N.D.
-0.4
N.D.
N.D.
+0.4
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
-0.2
N.D.
N.D.
+0.1
auxotrophy
Dropout Complete
N.D.
-0.1
N.D.
N.D.
+0.2
growth on oleic acid
YNB Oleic Acid
N.D.
-0.0
N.D.
N.D.
+0.2
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
-0.5
N.D.
N.D.
+0.6
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
-0.0
N.D.
N.D.
+0.2
growth on ricinoleic acid
YNB Glucose
N.D.
+0.0
N.D.
N.D.
+0.1
growth on oleic acid
YNB Glucose
N.D.
+0.1
N.D.
N.D.
+0.1
ypd buoyancy
40 hrs High Buoyancy
N.D.
+0.5
N.D.
N.D.
-0.0
ypd buoyancy
40 hrs Median Buoyancy
N.D.
+0.3
N.D.
N.D.
+0.2
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
+0.1
N.D.
N.D.
+0.6
ypd buoyancy
40 hrs Low Buoyancy
N.D.
+0.6
N.D.
N.D.
+0.2
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