Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 9051 and 9052 are separated by 157 nucleotides9052 and 9053 are separated by 333 nucleotides9053 and 9054 are separated by 513 nucleotides9054 and 9055 are separated by 599 nucleotides mRNA_683: 9051 - K01613 psd, PISD phosphatidylserine decarboxylase, at 1,638,810 to 1,640,262 9051 mRNA_684: 9052 - HMMPfam-Nucleotide-diphospho-sugar transferase-PF03407, at 1,640,420 to 1,643,110 9052 mRNA_685: 9053 - K10577 UBE2I, UBC9 ubiquitin-conjugating enzyme E2 I, at 1,643,444 to 1,644,500 9053 mRNA_686: 9054 - K06867 K06867 uncharacterized protein, at 1,645,014 to 1,645,916 9054 mRNA_687: 9055 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 1,646,516 to 1,647,919 9055
Group Condition mRNA_683 mRNA_684 mRNA_685 mRNA_686 mRNA_687
9051 9052 9053 9054 9055
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.6 +0.1 N.D. -0.1 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate -1.0 -0.1 N.D. +0.6 -0.1
growth on oleic acid YNB Glucose -0.2 -0.1 N.D. -0.3 +0.0
auxotrophy YNB Glucose -0.2 -0.0 N.D. +0.1 -0.3
auxotrophy Dropout Complete -0.1 -0.1 N.D. +0.1 -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.5 +0.0 N.D. -0.1 +0.2
ypd buoyancy 40 hrs No Buoyancy Separation -0.0 +0.0 N.D. -0.4 +0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.1 +0.1 N.D. +0.1 -0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.3 +0.1 N.D. -0.2 +0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 +0.1 N.D. +0.0 +0.1
auxotrophy YNB Glucose 75mM Methionine -0.3 +0.0 N.D. +0.1 +0.1
auxotrophy YNB Glucose 75mM Arginine +0.2 -0.0 N.D. +0.0 -0.1
growth on ricinoleic acid YNB Glucose +0.2 +0.0 N.D. -0.2 +0.0
facs on lipid accumulation Sorted High BODIPY Gate +0.3 -0.0 N.D. +0.4 -0.5
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 -0.1 N.D. +0.1 +0.2
growth on oleic acid YNB Oleic Acid +0.3 -0.2 N.D. +0.1 +0.0
ypd buoyancy 40 hrs Low Buoyancy +0.4 -0.2 N.D. +0.0 +0.1
growth on ypd YPD -0.2 +0.1 N.D. -0.2 +0.8
growth on ricinoleic acid YNB Ricinoleic Acid +0.2 -0.0 N.D. +0.1 +0.3
ypd buoyancy 40 hrs Median Buoyancy +0.5 -0.1 N.D. +0.2 +0.2
ypd buoyancy 40 hrs High Buoyancy +0.4 -0.0 N.D. +0.1 +0.4
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