Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 9055 and 9056 are separated by 390 nucleotides9056 and 9057 are separated by 522 nucleotides9057 and 9058 are separated by 164 nucleotides9058 and 9059 are separated by 590 nucleotides mRNA_687: 9055 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 1,646,516 to 1,647,919 9055 mRNA_688: 9056 - Hypothetical Protein, at 1,648,310 to 1,648,900 9056 mRNA_689: 9057 - HMMPfam-Eisosome component PIL1-PF13805, at 1,649,423 to 1,652,202 9057 mRNA_690: 9058 - HMMPfam-Tat binding protein 1(TBP-1)-interacting protein (TBPIP)-PF07106, at 1,652,367 to 1,653,596 9058 mRNA_691: 9059 - BLAST gliotoxin biosynthesis protein GliK [Marssonina b..., at 1,654,187 to 1,655,230 9059
Group Condition mRNA_687 mRNA_688 mRNA_689 mRNA_690 mRNA_691
9055 9056 9057 9058 9059
ypd buoyancy 40 hrs No Buoyancy Separation +0.1 -1.4 -0.9 N.D. -1.3
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 -1.1 -0.4 N.D. +0.1
auxotrophy YNB Glucose -0.3 -0.6 -0.1 N.D. -0.2
facs on lipid accumulation Sorted High BODIPY Gate -0.5 -0.3 +0.1 N.D. -0.3
ypd buoyancy 40 hrs High Buoyancy +0.4 -0.1 -0.8 N.D. -0.4
auxotrophy Dropout Complete -0.3 -0.4 +0.2 N.D. -0.3
ypd buoyancy 40 hrs Low Buoyancy +0.1 -0.1 -0.5 N.D. -0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.2 -0.1 -0.6 N.D. -0.2
auxotrophy YNB Glucose 75mM Methionine +0.1 +0.1 -0.5 N.D. -0.3
facs on lipid accumulation Sorted No BODIPY Gate -0.4 +0.5 -0.6 N.D. -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.2 -0.2 -0.5 N.D. +0.1
auxotrophy YNB Glucose 75mM Arginine -0.1 -0.2 -0.1 N.D. -0.0
growth on ricinoleic acid YNB Methylricinoleic Acid +0.2 -0.5 -0.5 N.D. +0.4
growth on ricinoleic acid YNB Glucose +0.0 -0.3 -0.3 N.D. +0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 +0.4 -0.4 N.D. -0.0
growth on oleic acid YNB Glucose +0.0 -0.3 +0.1 N.D. +0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 +0.3 +0.2 N.D. -0.2
ypd buoyancy 40 hrs Median Buoyancy +0.2 +0.7 -0.1 N.D. -0.3
growth on ricinoleic acid YNB Ricinoleic Acid +0.3 -0.2 -0.3 N.D. +0.7
growth on oleic acid YNB Oleic Acid +0.0 +0.6 -0.1 N.D. +0.2
growth on ypd YPD +0.8 +0.7 +0.5 N.D. +0.3
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