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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
9068 and 9069 are separated by 100 nucleotides
9069 and 9070 are separated by 500 nucleotides
9070 and 9071 are separated by 1248 nucleotides
9071 and 9072 are separated by 489 nucleotides
mRNA_700: 9068 - K12398 AP3M AP-3 complex subunit mu, at 1,672,376 to 1,674,226
9068
mRNA_701: 9069 - K08776 NPEPPS puromycin-sensitive aminopeptidase, at 1,674,327 to 1,678,341
9069
mRNA_702: 9070 - BLAST RAN guanine nucleotide release factor [Moesziomyces a..., at 1,678,842 to 1,679,928
9070
mRNA_703: 9071 - K20223 IPO7, RANBP7 importin-7, at 1,681,177 to 1,685,261
9071
mRNA_704: 9072 - Hypothetical Protein, at 1,685,751 to 1,686,578
9072
Group
Condition
mRNA
_700
mRNA
_701
mRNA
_702
mRNA
_703
mRNA
_704
9068
9069
9070
9071
9072
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
-0.2
+0.4
-1.0
-0.3
growth on ricinoleic acid
YNB Glucose
N.D.
+0.1
-0.6
+0.1
-0.4
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
+0.2
-1.8
+0.8
+0.4
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
+0.2
+0.1
-0.4
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
-0.1
+0.6
-0.7
+0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
-0.5
+0.6
+0.1
-0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
-1.0
+1.0
-0.1
+0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
-0.1
-0.4
+0.6
+0.2
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
-0.3
+0.7
-0.5
+0.3
ypd buoyancy
40 hrs Low Buoyancy
N.D.
-0.1
+0.5
-0.1
+0.0
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
-0.3
+0.5
+0.9
-0.6
growth on ypd
YPD
N.D.
-0.4
+0.7
+0.3
-0.1
ypd buoyancy
40 hrs High Buoyancy
N.D.
+0.1
+0.6
-0.0
-0.0
auxotrophy
YNB Glucose
N.D.
-0.0
+0.6
+0.4
-0.2
ypd buoyancy
40 hrs Median Buoyancy
N.D.
+0.1
+0.8
-0.2
+0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
-0.5
+1.3
+0.2
+0.0
auxotrophy
YNB Glucose 75mM Methionine
N.D.
+0.1
+0.5
+0.6
-0.0
auxotrophy
YNB Glucose 75mM Arginine
N.D.
+0.1
+0.5
+0.5
+0.2
auxotrophy
Dropout Complete
N.D.
-0.0
+0.8
+0.6
+0.2
growth on oleic acid
YNB Glucose
N.D.
-0.1
+0.9
+0.3
+0.4
growth on oleic acid
YNB Oleic Acid
N.D.
+0.2
+0.6
+0.4
+0.4
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