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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
9069 and 9070 are separated by 500 nucleotides
9070 and 9071 are separated by 1248 nucleotides
9071 and 9072 are separated by 489 nucleotides
9072 and 9073 are separated by 303 nucleotides
mRNA_701: 9069 - K08776 NPEPPS puromycin-sensitive aminopeptidase, at 1,674,327 to 1,678,341
9069
mRNA_702: 9070 - BLAST RAN guanine nucleotide release factor [Moesziomyces a..., at 1,678,842 to 1,679,928
9070
mRNA_703: 9071 - K20223 IPO7, RANBP7 importin-7, at 1,681,177 to 1,685,261
9071
mRNA_704: 9072 - Hypothetical Protein, at 1,685,751 to 1,686,578
9072
mRNA_705: 9073 - Hypothetical Protein, at 1,686,882 to 1,687,681
9073
Group
Condition
mRNA
_701
mRNA
_702
mRNA
_703
mRNA
_704
mRNA
_705
9069
9070
9071
9072
9073
growth on ricinoleic acid
YNB Glucose
+0.1
-0.6
+0.1
-0.4
-0.3
facs on lipid accumulation
Sorted High BODIPY Gate
-0.2
+0.4
-1.0
-0.3
+0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.2
-1.8
+0.8
+0.4
-0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.3
+0.5
+0.9
-0.6
-1.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
+0.6
-0.7
+0.2
-0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-1.0
+1.0
-0.1
+0.3
-0.3
facs on lipid accumulation
Sorted No BODIPY Gate
+0.2
+0.1
-0.4
-0.1
+0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.5
+0.6
+0.1
-0.3
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
-0.4
+0.6
+0.2
-0.2
ypd buoyancy
40 hrs Low Buoyancy
-0.1
+0.5
-0.1
+0.0
-0.2
ypd buoyancy
40 hrs No Buoyancy Separation
-0.3
+0.7
-0.5
+0.3
+0.0
auxotrophy
YNB Glucose
-0.0
+0.6
+0.4
-0.2
-0.3
ypd buoyancy
40 hrs High Buoyancy
+0.1
+0.6
-0.0
-0.0
+0.1
auxotrophy
YNB Glucose 75mM Methionine
+0.1
+0.5
+0.6
-0.0
-0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.5
+1.3
+0.2
+0.0
-0.2
auxotrophy
YNB Glucose 75mM Arginine
+0.1
+0.5
+0.5
+0.2
-0.3
ypd buoyancy
40 hrs Median Buoyancy
+0.1
+0.8
-0.2
+0.1
+0.1
growth on ypd
YPD
-0.4
+0.7
+0.3
-0.1
+0.6
growth on oleic acid
YNB Oleic Acid
+0.2
+0.6
+0.4
+0.4
-0.2
auxotrophy
Dropout Complete
-0.0
+0.8
+0.6
+0.2
-0.1
growth on oleic acid
YNB Glucose
-0.1
+0.9
+0.3
+0.4
+0.0
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