Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 9073 and 9074 are separated by 350 nucleotides9074 and 9075 are separated by 778 nucleotides9075 and 9076 are separated by 288 nucleotides9076 and 9077 are separated by 1001 nucleotides mRNA_705: 9073 - Hypothetical Protein, at 1,686,882 to 1,687,681 9073 mRNA_706: 9074 - BLAST Myelin gene regulatory factor [Chaetura pelagica], at 1,688,032 to 1,688,891 9074 mRNA_707: 9075 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 1,689,670 to 1,691,771 9075 mRNA_708: 9076 - HMMPfam-Ferritin-like domain-PF13668, at 1,692,060 to 1,693,397 9076 mRNA_709: 9077 - K08775 BRCA2, FANCD1 breast cancer 2 susceptibility protein, at 1,694,399 to 1,698,266 9077
Group Condition mRNA_705 mRNA_706 mRNA_707 mRNA_708 mRNA_709
9073 9074 9075 9076 9077
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 -0.4 -2.6 -0.2 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 -0.2 -1.6 -0.1 -1.0
ypd buoyancy 40 hrs No Buoyancy Separation +0.0 -0.5 -0.7 -0.7 -1.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 -0.3 -0.7 -0.1 -0.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 -0.3 -0.1 -0.4 -0.5
facs on lipid accumulation Sorted High BODIPY Gate +0.0 +0.1 -0.0 -0.0 -1.7
auxotrophy Dropout Complete -0.1 +0.2 -0.4 -0.0 -1.0
auxotrophy YNB Glucose 75mM Methionine -0.3 -0.0 -0.2 +0.0 -0.8
auxotrophy YNB Glucose 75mM Arginine -0.3 +0.2 -0.1 +0.1 -1.1
auxotrophy YNB Glucose -0.3 +0.1 -0.1 +0.1 -0.7
facs on lipid accumulation Sorted Low BODIPY Gate -1.0 -0.2 +0.4 -0.5 +0.4
growth on ricinoleic acid YNB Glucose -0.3 +0.0 +0.1 +0.0 -0.4
facs on lipid accumulation Sorted No BODIPY Gate +0.0 +0.0 -0.0 +0.0 -0.4
growth on oleic acid YNB Oleic Acid -0.2 +0.3 -0.7 +0.1 +0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 +0.2 +0.2 -0.2 -0.4
ypd buoyancy 40 hrs Low Buoyancy -0.2 -0.1 -0.1 -0.1 +0.5
growth on ypd YPD +0.6 -0.6 +0.4 -0.2 -0.1
growth on oleic acid YNB Glucose +0.0 +0.3 -0.1 -0.0 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3 +0.4 -0.0 -0.5 +0.6
ypd buoyancy 40 hrs High Buoyancy +0.1 -0.4 +0.1 -0.2 +0.6
ypd buoyancy 40 hrs Median Buoyancy +0.1 -0.2 +0.0 +0.0 +0.9
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