Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 9074 and 9075 are separated by 778 nucleotides9075 and 9076 are separated by 288 nucleotides9076 and 9077 are separated by 1001 nucleotides9077 and 9078 are separated by 102 nucleotides mRNA_706: 9074 - BLAST Myelin gene regulatory factor [Chaetura pelagica], at 1,688,032 to 1,688,891 9074 mRNA_707: 9075 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 1,689,670 to 1,691,771 9075 mRNA_708: 9076 - HMMPfam-Ferritin-like domain-PF13668, at 1,692,060 to 1,693,397 9076 mRNA_709: 9077 - K08775 BRCA2, FANCD1 breast cancer 2 susceptibility protein, at 1,694,399 to 1,698,266 9077 mRNA_710: 9078 - Hypothetical Protein, at 1,698,369 to 1,699,949 9078
Group Condition mRNA_706 mRNA_707 mRNA_708 mRNA_709 mRNA_710
9074 9075 9076 9077 9078
growth on ricinoleic acid YNB Ricinoleic Acid -0.4 -2.6 -0.2 -0.2 +0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.5 -0.7 -0.7 -1.1 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 -1.6 -0.1 -1.0 -0.1
facs on lipid accumulation Sorted High BODIPY Gate +0.1 -0.0 -0.0 -1.7 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.3 -0.7 -0.1 -0.5 -0.0
auxotrophy Dropout Complete +0.2 -0.4 -0.0 -1.0 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 -0.1 -0.4 -0.5 +0.1
auxotrophy YNB Glucose 75mM Methionine -0.0 -0.2 +0.0 -0.8 -0.2
auxotrophy YNB Glucose 75mM Arginine +0.2 -0.1 +0.1 -1.1 -0.1
auxotrophy YNB Glucose +0.1 -0.1 +0.1 -0.7 +0.0
facs on lipid accumulation Sorted No BODIPY Gate +0.0 -0.0 +0.0 -0.4 -0.1
growth on oleic acid YNB Oleic Acid +0.3 -0.7 +0.1 +0.2 -0.2
growth on ricinoleic acid YNB Glucose +0.0 +0.1 +0.0 -0.4 -0.0
growth on ypd YPD -0.6 +0.4 -0.2 -0.1 +0.5
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 +0.2 -0.2 -0.4 +0.3
growth on oleic acid YNB Glucose +0.3 -0.1 -0.0 -0.1 +0.0
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 +0.4 -0.5 +0.4 +0.1
ypd buoyancy 40 hrs High Buoyancy -0.4 +0.1 -0.2 +0.6 +0.1
ypd buoyancy 40 hrs Low Buoyancy -0.1 -0.1 -0.1 +0.5 +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.4 -0.0 -0.5 +0.6 +0.0
ypd buoyancy 40 hrs Median Buoyancy -0.2 +0.0 +0.0 +0.9 -0.0
remove
mRNA_706
plot
remove
mRNA_707
plot
remove
mRNA_708
remove
mRNA_709
plot
remove
mRNA_710
plot