Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 9075 and 9076 are separated by 288 nucleotides9076 and 9077 are separated by 1001 nucleotides9077 and 9078 are separated by 102 nucleotides9078 and 9079 are separated by 549 nucleotides mRNA_707: 9075 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 1,689,670 to 1,691,771 9075 mRNA_708: 9076 - HMMPfam-Ferritin-like domain-PF13668, at 1,692,060 to 1,693,397 9076 mRNA_709: 9077 - K08775 BRCA2, FANCD1 breast cancer 2 susceptibility protein, at 1,694,399 to 1,698,266 9077 mRNA_710: 9078 - Hypothetical Protein, at 1,698,369 to 1,699,949 9078 mRNA_711: 9079 - K00972 UAP1 UDP-N-acetylglucosamine/UDP-N-acetylgalactosamine diphosphorylase, at 1,700,499 to 1,702,038 9079
Group Condition mRNA_707 mRNA_708 mRNA_709 mRNA_710 mRNA_711
9075 9076 9077 9078 9079
growth on ricinoleic acid YNB Methylricinoleic Acid -1.6 -0.1 -1.0 -0.1 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid -2.6 -0.2 -0.2 +0.1 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation -0.7 -0.7 -1.1 -0.1 N.D.
facs on lipid accumulation Sorted High BODIPY Gate -0.0 -0.0 -1.7 -0.1 N.D.
auxotrophy Dropout Complete -0.4 -0.0 -1.0 -0.2 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.7 -0.1 -0.5 -0.0 N.D.
auxotrophy YNB Glucose 75mM Arginine -0.1 +0.1 -1.1 -0.1 N.D.
auxotrophy YNB Glucose 75mM Methionine -0.2 +0.0 -0.8 -0.2 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 -0.4 -0.5 +0.1 N.D.
auxotrophy YNB Glucose -0.1 +0.1 -0.7 +0.0 N.D.
growth on oleic acid YNB Oleic Acid -0.7 +0.1 +0.2 -0.2 N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.0 +0.0 -0.4 -0.1 N.D.
growth on ricinoleic acid YNB Glucose +0.1 +0.0 -0.4 -0.0 N.D.
growth on oleic acid YNB Glucose -0.1 -0.0 -0.1 +0.0 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 -0.2 -0.4 +0.3 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.0 -0.5 +0.6 +0.0 N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.1 -0.1 +0.5 +0.1 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate +0.4 -0.5 +0.4 +0.1 N.D.
growth on ypd YPD +0.4 -0.2 -0.1 +0.5 N.D.
ypd buoyancy 40 hrs High Buoyancy +0.1 -0.2 +0.6 +0.1 N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.0 +0.0 +0.9 -0.0 N.D.
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