Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 9084 and 9085 are separated by 447 nucleotides9085 and 9086 are separated by 287 nucleotides9086 and 9087 are separated by 428 nucleotides9087 and 9088 are separated by 779 nucleotides mRNA_716: 9084 - K01663 HIS7 glutamine amidotransferase / cyclase, at 1,709,868 to 1,711,961 9084 mRNA_717: 9085 - K00058 serA, PHGDH D-3-phosphoglycerate dehydrogenase, at 1,712,409 to 1,714,095 9085 mRNA_718: 9086 - KOG2776 Metallopeptidase, at 1,714,383 to 1,716,364 9086 mRNA_719: 9087 - HMMPfam-Protein of unknown function (DUF3074)-PF11274, at 1,716,793 to 1,718,081 9087 mRNA_720: 9088 - K00993 EPT1 ethanolaminephosphotransferase, at 1,718,861 to 1,720,406 9088
Group Condition mRNA_716 mRNA_717 mRNA_718 mRNA_719 mRNA_720
9084 9085 9086 9087 9088
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. N.D. -0.5 -0.8 -0.3
growth on ricinoleic acid YNB Glucose N.D. N.D. -0.5 -0.5 -0.5
facs on lipid accumulation Sorted High BODIPY Gate N.D. N.D. -1.0 -0.1 -0.3
growth on ricinoleic acid YNB Ricinoleic Acid N.D. N.D. -0.7 -0.4 +0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. N.D. +0.3 -0.4 -0.6
auxotrophy YNB Glucose 75mM Arginine N.D. N.D. -0.5 -0.1 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. N.D. +0.2 -0.3 -0.5
auxotrophy Dropout Complete N.D. N.D. -0.2 -0.2 -0.2
auxotrophy YNB Glucose 75mM Methionine N.D. N.D. -0.2 -0.2 -0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. N.D. +0.4 -0.2 -0.6
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. N.D. +0.8 -0.4 -0.9
auxotrophy YNB Glucose N.D. N.D. -0.3 +0.0 -0.1
facs on lipid accumulation Sorted No BODIPY Gate N.D. N.D. -0.2 +0.0 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate N.D. N.D. +0.2 -0.1 -0.3
ypd buoyancy 40 hrs Median Buoyancy N.D. N.D. -0.3 +0.1 +0.2
growth on oleic acid YNB Oleic Acid N.D. N.D. -0.4 +0.2 +0.4
ypd buoyancy 40 hrs High Buoyancy N.D. N.D. -0.1 +0.1 +0.2
ypd buoyancy 40 hrs Low Buoyancy N.D. N.D. -0.1 +0.2 +0.2
growth on oleic acid YNB Glucose N.D. N.D. +0.0 +0.3 +0.0
ypd buoyancy 40 hrs No Buoyancy Separation N.D. N.D. -0.6 +0.7 +0.3
growth on ypd YPD N.D. N.D. +0.5 -0.0 +0.5
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