Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
9087 and 9088 are separated by 779 nucleotides
9088 and 9089 are separated by 115 nucleotides
9089 and 9090 are separated by 552 nucleotides
9090 and 9091 are separated by 472 nucleotides
mRNA_719: 9087 - HMMPfam-Protein of unknown function (DUF3074)-PF11274, at 1,716,793 to 1,718,081
9087
mRNA_720: 9088 - K00993 EPT1 ethanolaminephosphotransferase, at 1,718,861 to 1,720,406
9088
mRNA_721: 9089 - Hypothetical Protein, at 1,720,522 to 1,720,982
9089
mRNA_722: 9090 - HMMPfam-Thiopurine S-methyltransferase (TPMT)-PF05724,ProSiteProfiles-Thiopurine or thiol or thiocyanate S-methyltransferase (TPMT) family profile.-PS51585,SUPERFAMILY--SSF53335, at 1,721,535 to 1,722,519
9090
mRNA_723: 9091 - K07127 uraH, pucM, hiuH 5-hydroxyisourate hydrolase, at 1,722,992 to 1,724,496
9091
Group
Condition
mRNA
_719
mRNA
_720
mRNA
_721
mRNA
_722
mRNA
_723
9087
9088
9089
9090
9091
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.4
-0.9
N.D.
-0.8
+0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.8
-0.3
N.D.
+0.1
-0.5
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.4
-0.6
N.D.
-0.5
+0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.2
-0.6
N.D.
-0.4
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.3
-0.5
N.D.
-0.6
+0.2
growth on ricinoleic acid
YNB Glucose
-0.5
-0.5
N.D.
+0.4
-0.4
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.4
+0.3
N.D.
+0.2
-1.0
auxotrophy
Dropout Complete
-0.2
-0.2
N.D.
+0.4
-0.6
auxotrophy
YNB Glucose 75mM Methionine
-0.2
-0.0
N.D.
+0.1
-0.4
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.1
-0.3
N.D.
+0.9
-1.0
auxotrophy
YNB Glucose 75mM Arginine
-0.1
-0.1
N.D.
+0.0
-0.3
facs on lipid accumulation
Sorted No BODIPY Gate
+0.0
-0.1
N.D.
+0.2
-0.2
growth on ypd
YPD
-0.0
+0.5
N.D.
-0.4
-0.1
ypd buoyancy
40 hrs Low Buoyancy
+0.2
+0.2
N.D.
+0.1
-0.4
auxotrophy
YNB Glucose
+0.0
-0.1
N.D.
+0.7
-0.3
growth on oleic acid
YNB Glucose
+0.3
+0.0
N.D.
+0.4
-0.3
growth on oleic acid
YNB Oleic Acid
+0.2
+0.4
N.D.
+0.4
-0.5
ypd buoyancy
40 hrs Median Buoyancy
+0.1
+0.2
N.D.
+0.5
-0.2
facs on lipid accumulation
Sorted High BODIPY Gate
-0.1
-0.3
N.D.
+0.3
+0.8
ypd buoyancy
40 hrs No Buoyancy Separation
+0.7
+0.3
N.D.
-0.5
+0.2
ypd buoyancy
40 hrs High Buoyancy
+0.1
+0.2
N.D.
+0.8
-0.1
remove
mRNA_719
plot
remove
mRNA_720
plot
remove
mRNA_721
remove
mRNA_722
plot
remove
mRNA_723
plot