Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
9088 and 9089 are separated by 115 nucleotides
9089 and 9090 are separated by 552 nucleotides
9090 and 9091 are separated by 472 nucleotides
9091 and 9092 are separated by 257 nucleotides
mRNA_720: 9088 - K00993 EPT1 ethanolaminephosphotransferase, at 1,718,861 to 1,720,406
9088
mRNA_721: 9089 - Hypothetical Protein, at 1,720,522 to 1,720,982
9089
mRNA_722: 9090 - HMMPfam-Thiopurine S-methyltransferase (TPMT)-PF05724,ProSiteProfiles-Thiopurine or thiol or thiocyanate S-methyltransferase (TPMT) family profile.-PS51585,SUPERFAMILY--SSF53335, at 1,721,535 to 1,722,519
9090
mRNA_723: 9091 - K07127 uraH, pucM, hiuH 5-hydroxyisourate hydrolase, at 1,722,992 to 1,724,496
9091
mRNA_724: 9092 - HMMPfam-Ion transport protein-PF00520,SUPERFAMILY--SSF81324, at 1,724,754 to 1,725,732
9092
Group
Condition
mRNA
_720
mRNA
_721
mRNA
_722
mRNA
_723
mRNA
_724
9088
9089
9090
9091
9092
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.6
N.D.
-0.5
+0.1
-0.5
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.9
N.D.
-0.8
+0.1
+0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.6
N.D.
-0.4
-0.1
-0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.5
N.D.
-0.6
+0.2
-0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.3
N.D.
+0.1
-0.5
-0.2
growth on ricinoleic acid
YNB Glucose
-0.5
N.D.
+0.4
-0.4
-0.4
facs on lipid accumulation
Sorted No BODIPY Gate
-0.1
N.D.
+0.2
-0.2
-0.4
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.3
N.D.
+0.9
-1.0
-0.1
auxotrophy
YNB Glucose 75mM Methionine
-0.0
N.D.
+0.1
-0.4
-0.1
auxotrophy
Dropout Complete
-0.2
N.D.
+0.4
-0.6
+0.0
ypd buoyancy
40 hrs No Buoyancy Separation
+0.3
N.D.
-0.5
+0.2
-0.4
auxotrophy
YNB Glucose 75mM Arginine
-0.1
N.D.
+0.0
-0.3
-0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.3
N.D.
+0.2
-1.0
+0.1
growth on oleic acid
YNB Glucose
+0.0
N.D.
+0.4
-0.3
-0.2
ypd buoyancy
40 hrs Low Buoyancy
+0.2
N.D.
+0.1
-0.4
+0.0
growth on oleic acid
YNB Oleic Acid
+0.4
N.D.
+0.4
-0.5
-0.3
growth on ypd
YPD
+0.5
N.D.
-0.4
-0.1
+0.2
auxotrophy
YNB Glucose
-0.1
N.D.
+0.7
-0.3
+0.1
ypd buoyancy
40 hrs Median Buoyancy
+0.2
N.D.
+0.5
-0.2
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
-0.3
N.D.
+0.3
+0.8
+0.2
ypd buoyancy
40 hrs High Buoyancy
+0.2
N.D.
+0.8
-0.1
-0.0
remove
mRNA_720
plot
remove
mRNA_721
plot
remove
mRNA_722
remove
mRNA_723
plot
remove
mRNA_724
plot