Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 9089 and 9090 are separated by 552 nucleotides9090 and 9091 are separated by 472 nucleotides9091 and 9092 are separated by 257 nucleotides9092 and 9093 are separated by 108 nucleotides mRNA_721: 9089 - Hypothetical Protein, at 1,720,522 to 1,720,982 9089 mRNA_722: 9090 - HMMPfam-Thiopurine S-methyltransferase (TPMT)-PF05724,ProSiteProfiles-Thiopurine or thiol or thiocyanate S-methyltransferase (TPMT) family profile.-PS51585,SUPERFAMILY--SSF53335, at 1,721,535 to 1,722,519 9090 mRNA_723: 9091 - K07127 uraH, pucM, hiuH 5-hydroxyisourate hydrolase, at 1,722,992 to 1,724,496 9091 mRNA_724: 9092 - HMMPfam-Ion transport protein-PF00520,SUPERFAMILY--SSF81324, at 1,724,754 to 1,725,732 9092 mRNA_725: 9093 - KOG2702 Predicted panthothenate kinase/uridine kinase-related protein, at 1,725,841 to 1,726,998 9093
Group Condition mRNA_721 mRNA_722 mRNA_723 mRNA_724 mRNA_725
9089 9090 9091 9092 9093
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. +0.1 -0.5 -0.2 -0.5
growth on ricinoleic acid YNB Ricinoleic Acid N.D. +0.2 -1.0 +0.1 -0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. -0.6 +0.2 -0.3 -0.2
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -0.5 +0.2 -0.4 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. -0.8 +0.1 +0.1 -0.2
growth on oleic acid YNB Oleic Acid N.D. +0.4 -0.5 -0.3 -0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. -0.4 -0.1 -0.3 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate N.D. +0.9 -1.0 -0.1 -0.5
facs on lipid accumulation Sorted No BODIPY Gate N.D. +0.2 -0.2 -0.4 -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. -0.5 +0.1 -0.5 +0.2
growth on ricinoleic acid YNB Glucose N.D. +0.4 -0.4 -0.4 -0.3
auxotrophy YNB Glucose 75mM Methionine N.D. +0.1 -0.4 -0.1 -0.2
auxotrophy YNB Glucose 75mM Arginine N.D. +0.0 -0.3 -0.0 -0.3
growth on ypd YPD N.D. -0.4 -0.1 +0.2 -0.1
ypd buoyancy 40 hrs Low Buoyancy N.D. +0.1 -0.4 +0.0 -0.1
growth on oleic acid YNB Glucose N.D. +0.4 -0.3 -0.2 -0.1
auxotrophy Dropout Complete N.D. +0.4 -0.6 +0.0 +0.2
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.5 -0.2 -0.1 -0.1
auxotrophy YNB Glucose N.D. +0.7 -0.3 +0.1 +0.1
ypd buoyancy 40 hrs High Buoyancy N.D. +0.8 -0.1 -0.0 -0.2
facs on lipid accumulation Sorted High BODIPY Gate N.D. +0.3 +0.8 +0.2 -0.1
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