Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
9092 and 9093 are separated by 108 nucleotides
9093 and 9094 are separated by 841 nucleotides
9094 and 9095 are separated by 607 nucleotides
9095 and 9096 are separated by 282 nucleotides
mRNA_724: 9092 - HMMPfam-Ion transport protein-PF00520,SUPERFAMILY--SSF81324, at 1,724,754 to 1,725,732
9092
mRNA_725: 9093 - KOG2702 Predicted panthothenate kinase/uridine kinase-related protein, at 1,725,841 to 1,726,998
9093
mRNA_726: 9094 - HMMPfam-Ferritin-like domain-PF13668, at 1,727,840 to 1,729,202
9094
mRNA_727: 9095 - HMMPfam-Peroxidase, family 2-PF01328,ProSiteProfiles-Heme haloperoxidase family profile.-PS51405,SUPERFAMILY--SSF47571, at 1,729,810 to 1,731,316
9095
mRNA_728: 9096 - K18669 DYRK2_3_4 dual specificity tyrosine-phosphorylation-regulated kinase 2/3/4, at 1,731,599 to 1,733,273
9096
Group
Condition
mRNA
_724
mRNA
_725
mRNA
_726
mRNA
_727
mRNA
_728
9092
9093
9094
9095
9096
ypd buoyancy
40 hrs No Buoyancy Separation
-0.4
-0.2
-1.9
-0.1
+0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.2
-0.5
-0.9
-0.1
+0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.1
-0.5
-0.4
-0.0
-0.1
ypd buoyancy
40 hrs Median Buoyancy
-0.1
-0.1
-0.7
+0.0
-0.2
growth on oleic acid
YNB Oleic Acid
-0.3
-0.4
-0.3
-0.1
+0.6
growth on oleic acid
YNB Glucose
-0.2
-0.1
-0.1
-0.3
+0.3
facs on lipid accumulation
Sorted High BODIPY Gate
+0.2
-0.1
+0.3
-0.7
-0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.5
+0.2
+0.3
-0.2
-0.2
facs on lipid accumulation
Sorted No BODIPY Gate
-0.4
-0.3
+0.3
-0.2
+0.2
growth on ricinoleic acid
YNB Glucose
-0.4
-0.3
+0.1
+0.0
+0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.3
-0.2
+0.1
+0.2
+0.1
growth on ypd
YPD
+0.2
-0.1
-0.2
-0.1
+0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.1
-0.4
+0.3
+0.0
-0.1
ypd buoyancy
40 hrs Low Buoyancy
+0.0
-0.1
-0.1
+0.2
+0.0
auxotrophy
YNB Glucose 75mM Arginine
-0.0
-0.3
+0.3
-0.0
+0.1
ypd buoyancy
40 hrs High Buoyancy
-0.0
-0.2
+0.4
+0.1
-0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.3
-0.1
+0.6
+0.2
-0.3
auxotrophy
Dropout Complete
+0.0
+0.2
+0.0
-0.2
+0.2
auxotrophy
YNB Glucose 75mM Methionine
-0.1
-0.2
+0.6
+0.1
+0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.1
-0.2
+0.5
+0.3
-0.1
auxotrophy
YNB Glucose
+0.1
+0.1
-0.0
+0.3
+0.3
remove
mRNA_724
plot
remove
mRNA_725
plot
remove
mRNA_726
remove
mRNA_727
plot
remove
mRNA_728
plot