Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 9096 and 9097 are separated by 526 nucleotides9097 and 9098 are separated by 457 nucleotides9098 and 9099 are separated by 314 nucleotides9099 and 9100 are separated by 382 nucleotides mRNA_728: 9096 - K18669 DYRK2_3_4 dual specificity tyrosine-phosphorylation-regulated kinase 2/3/4, at 1,731,599 to 1,733,273 9096 mRNA_729: 9097 - BLAST CMGC/DYRK/DYRK2 protein kinase [Microbotryum lychnidi..., at 1,733,800 to 1,738,518 9097 mRNA_730: 9098 - KOG0061 Transporter, ABC superfamily (Breast cancer resistance protein), at 1,738,976 to 1,743,135 9098 mRNA_731: 9099 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 1,743,450 to 1,746,549 9099 mRNA_732: 9100 - HMMPfam-Dioxygenase-PF00775,HMMPfam-Catechol dioxygenase N terminus-PF04444,SUPERFAMILY--SSF49482, at 1,746,932 to 1,748,724 9100
Group Condition mRNA_728 mRNA_729 mRNA_730 mRNA_731 mRNA_732
9096 9097 9098 9099 9100
facs on lipid accumulation Sorted High BODIPY Gate -0.2 -0.5 -1.0 -0.2 -0.2
ypd buoyancy 40 hrs No Buoyancy Separation +0.0 -0.6 -0.6 +0.1 -0.1
facs on lipid accumulation Sorted No BODIPY Gate +0.2 -0.1 -0.9 -0.2 +0.2
ypd buoyancy 40 hrs High Buoyancy -0.2 -0.2 +0.0 +0.0 -0.3
ypd buoyancy 40 hrs Median Buoyancy -0.2 -0.1 -0.1 +0.0 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 +0.1 -0.4 -0.2 +0.3
ypd buoyancy 40 hrs Low Buoyancy +0.0 -0.2 +0.0 +0.0 -0.2
auxotrophy Dropout Complete +0.2 -0.1 +0.4 -0.2 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 +0.4 -0.6 -0.1 +0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 +0.3 +0.1 -0.1 +0.2
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 +0.4 -0.2 +0.0 -0.2
auxotrophy YNB Glucose 75mM Arginine +0.1 -0.0 +0.2 -0.0 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 +0.5 -0.0 +0.1 -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3 +0.5 -0.1 +0.1 +0.1
growth on ricinoleic acid YNB Glucose +0.3 +0.3 -0.0 -0.2 -0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 +0.6 -0.1 +0.0 +0.2
auxotrophy YNB Glucose 75mM Methionine +0.1 -0.1 +0.2 +0.3 +0.1
growth on ypd YPD +0.1 +0.4 -0.0 +0.1 +0.4
auxotrophy YNB Glucose +0.3 +0.1 +0.3 +0.3 -0.0
growth on oleic acid YNB Glucose +0.3 +0.2 +0.2 +0.2 +0.2
growth on oleic acid YNB Oleic Acid +0.6 +0.3 +0.3 +0.3 +0.0
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