Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 9100 and 9101 are separated by 42 nucleotides9101 and 9102 are separated by 395 nucleotides9102 and 9103 are separated by 755 nucleotides9103 and 9104 are separated by 153 nucleotides mRNA_732: 9100 - HMMPfam-Dioxygenase-PF00775,HMMPfam-Catechol dioxygenase N terminus-PF04444,SUPERFAMILY--SSF49482, at 1,746,932 to 1,748,724 9100 mRNA_733: 9101 - K13954 yiaY alcohol dehydrogenase, at 1,748,767 to 1,750,473 9101 mRNA_734: 9102 - K08149 SLC2A12, GLUT12 MFS transporter, SP family, solute carrier family 2 (facilitated glucose transporter), member 12, at 1,750,869 to 1,753,209 9102 mRNA_735: 9103 - KOG0175 20S proteasome, regulatory subunit beta type PSMB5/PSMB8/PRE2, at 1,753,965 to 1,755,090 9103 mRNA_736: 9104 - K00034 gdh glucose 1-dehydrogenase, at 1,755,244 to 1,756,596 9104
Group Condition mRNA_732 mRNA_733 mRNA_734 mRNA_735 mRNA_736
9100 9101 9102 9103 9104
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 +0.4 +0.1 -1.0 -0.2
ypd buoyancy 40 hrs Low Buoyancy -0.2 +0.1 +0.1 -0.3 -0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.2 -0.1 +0.2 -0.2 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 +0.1 -0.2 -0.5 -0.0
auxotrophy Dropout Complete -0.3 -0.2 -0.4 +0.2 +0.3
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 +0.1 -0.4 +0.1 +0.2
auxotrophy YNB Glucose 75mM Arginine -0.1 -0.2 -0.4 +0.2 +0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.2 +0.0 -0.3 -0.2 +0.1
auxotrophy YNB Glucose 75mM Methionine +0.1 -0.0 -0.2 -0.3 +0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.3 -0.1 -0.1 -0.4 +0.3
growth on ypd YPD +0.4 -0.2 -0.3 +0.0 +0.0
ypd buoyancy 40 hrs Median Buoyancy -0.1 +0.1 +0.0 +0.0 -0.1
growth on ricinoleic acid YNB Glucose -0.0 -0.0 -0.2 +0.1 +0.3
facs on lipid accumulation Sorted No BODIPY Gate +0.2 -0.2 +0.3 -0.0 -0.1
ypd buoyancy 40 hrs High Buoyancy -0.3 +0.1 +0.4 +0.2 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 +0.2 +0.0 -0.2 +0.2
facs on lipid accumulation Sorted Low BODIPY Gate +0.3 -0.6 +0.4 +0.2 +0.1
auxotrophy YNB Glucose -0.0 -0.1 -0.4 +0.5 +0.4
growth on oleic acid YNB Glucose +0.2 +0.0 -0.4 +0.3 +0.6
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 +0.1 +0.0 +0.6 +0.5
growth on oleic acid YNB Oleic Acid +0.0 +0.1 +0.1 +0.1 +0.7
remove
mRNA_732
plot
remove
mRNA_733
plot
remove
mRNA_734
remove
mRNA_735
plot
remove
mRNA_736
plot