Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
9100 and 9101 are separated by 42 nucleotides
9101 and 9102 are separated by 395 nucleotides
9102 and 9103 are separated by 755 nucleotides
9103 and 9104 are separated by 153 nucleotides
mRNA_732: 9100 - HMMPfam-Dioxygenase-PF00775,HMMPfam-Catechol dioxygenase N terminus-PF04444,SUPERFAMILY--SSF49482, at 1,746,932 to 1,748,724
9100
mRNA_733: 9101 - K13954 yiaY alcohol dehydrogenase, at 1,748,767 to 1,750,473
9101
mRNA_734: 9102 - K08149 SLC2A12, GLUT12 MFS transporter, SP family, solute carrier family 2 (facilitated glucose transporter), member 12, at 1,750,869 to 1,753,209
9102
mRNA_735: 9103 - KOG0175 20S proteasome, regulatory subunit beta type PSMB5/PSMB8/PRE2, at 1,753,965 to 1,755,090
9103
mRNA_736: 9104 - K00034 gdh glucose 1-dehydrogenase, at 1,755,244 to 1,756,596
9104
Group
Condition
mRNA
_732
mRNA
_733
mRNA
_734
mRNA
_735
mRNA
_736
9100
9101
9102
9103
9104
ypd buoyancy
40 hrs No Buoyancy Separation
-0.1
+0.4
+0.1
-1.0
-0.2
ypd buoyancy
40 hrs Low Buoyancy
-0.2
+0.1
+0.1
-0.3
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
-0.2
-0.1
+0.2
-0.2
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.2
+0.1
-0.2
-0.5
-0.0
auxotrophy
Dropout Complete
-0.3
-0.2
-0.4
+0.2
+0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.2
+0.1
-0.4
+0.1
+0.2
auxotrophy
YNB Glucose 75mM Arginine
-0.1
-0.2
-0.4
+0.2
+0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.2
+0.0
-0.3
-0.2
+0.1
auxotrophy
YNB Glucose 75mM Methionine
+0.1
-0.0
-0.2
-0.3
+0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.3
-0.1
-0.1
-0.4
+0.3
growth on ypd
YPD
+0.4
-0.2
-0.3
+0.0
+0.0
ypd buoyancy
40 hrs Median Buoyancy
-0.1
+0.1
+0.0
+0.0
-0.1
growth on ricinoleic acid
YNB Glucose
-0.0
-0.0
-0.2
+0.1
+0.3
facs on lipid accumulation
Sorted No BODIPY Gate
+0.2
-0.2
+0.3
-0.0
-0.1
ypd buoyancy
40 hrs High Buoyancy
-0.3
+0.1
+0.4
+0.2
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.1
+0.2
+0.0
-0.2
+0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.3
-0.6
+0.4
+0.2
+0.1
auxotrophy
YNB Glucose
-0.0
-0.1
-0.4
+0.5
+0.4
growth on oleic acid
YNB Glucose
+0.2
+0.0
-0.4
+0.3
+0.6
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.2
+0.1
+0.0
+0.6
+0.5
growth on oleic acid
YNB Oleic Acid
+0.0
+0.1
+0.1
+0.1
+0.7
remove
mRNA_732
plot
remove
mRNA_733
plot
remove
mRNA_734
remove
mRNA_735
plot
remove
mRNA_736
plot