Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 9101 and 9102 are separated by 395 nucleotides9102 and 9103 are separated by 755 nucleotides9103 and 9104 are separated by 153 nucleotides9104 and 9105 are separated by 309 nucleotides mRNA_733: 9101 - K13954 yiaY alcohol dehydrogenase, at 1,748,767 to 1,750,473 9101 mRNA_734: 9102 - K08149 SLC2A12, GLUT12 MFS transporter, SP family, solute carrier family 2 (facilitated glucose transporter), member 12, at 1,750,869 to 1,753,209 9102 mRNA_735: 9103 - KOG0175 20S proteasome, regulatory subunit beta type PSMB5/PSMB8/PRE2, at 1,753,965 to 1,755,090 9103 mRNA_736: 9104 - K00034 gdh glucose 1-dehydrogenase, at 1,755,244 to 1,756,596 9104 mRNA_737: 9105 - HMMPfam-EthD domain-PF07110,SUPERFAMILY--SSF54909,TIGRFAM-TIGR02118 conserved hypothetical protein-TIGR02118, at 1,756,906 to 1,757,418 9105
Group Condition mRNA_733 mRNA_734 mRNA_735 mRNA_736 mRNA_737
9101 9102 9103 9104 9105
ypd buoyancy 40 hrs No Buoyancy Separation +0.4 +0.1 -1.0 -0.2 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 -0.2 -0.5 -0.0 N.D.
growth on ypd YPD -0.2 -0.3 +0.0 +0.0 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.0 -0.3 -0.2 +0.1 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 -0.1 -0.4 +0.3 N.D.
ypd buoyancy 40 hrs Low Buoyancy +0.1 +0.1 -0.3 -0.1 N.D.
facs on lipid accumulation Sorted High BODIPY Gate -0.1 +0.2 -0.2 -0.1 N.D.
auxotrophy YNB Glucose 75mM Methionine -0.0 -0.2 -0.3 +0.3 N.D.
auxotrophy YNB Glucose 75mM Arginine -0.2 -0.4 +0.2 +0.3 N.D.
auxotrophy Dropout Complete -0.2 -0.4 +0.2 +0.3 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 -0.4 +0.1 +0.2 N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.2 +0.3 -0.0 -0.1 N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.1 +0.0 +0.0 -0.1 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.6 +0.4 +0.2 +0.1 N.D.
growth on ricinoleic acid YNB Glucose -0.0 -0.2 +0.1 +0.3 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 +0.0 -0.2 +0.2 N.D.
growth on oleic acid YNB Glucose +0.0 -0.4 +0.3 +0.6 N.D.
auxotrophy YNB Glucose -0.1 -0.4 +0.5 +0.4 N.D.
ypd buoyancy 40 hrs High Buoyancy +0.1 +0.4 +0.2 -0.1 N.D.
growth on oleic acid YNB Oleic Acid +0.1 +0.1 +0.1 +0.7 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 +0.0 +0.6 +0.5 N.D.
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