Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 9105 and 9106 are separated by 580 nucleotides9106 and 9107 are separated by 1800 nucleotides9107 and 9108 are separated by 230 nucleotides9108 and 9109 are separated by 153 nucleotides mRNA_737: 9105 - HMMPfam-EthD domain-PF07110,SUPERFAMILY--SSF54909,TIGRFAM-TIGR02118 conserved hypothetical protein-TIGR02118, at 1,756,906 to 1,757,418 9105 mRNA_738: 9106 - K06606 iolI 2-keto-myo-inositol isomerase, at 1,757,999 to 1,760,705 9106 mRNA_739: 9107 - K07359 CAMKK calcium/calmodulin-dependent protein kinase kinase, at 1,762,506 to 1,766,867 9107 mRNA_740: 9108 - K13103 TFIP11 tuftelin-interacting protein 11, at 1,767,098 to 1,770,950 9108 mRNA_741: 9109 - K12858 DDX23, PRP28 ATP-dependent RNA helicase DDX23/PRP28, at 1,771,104 to 1,774,231 9109
Group Condition mRNA_737 mRNA_738 mRNA_739 mRNA_740 mRNA_741
9105 9106 9107 9108 9109
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -0.2 -1.5 N.D. N.D.
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -0.7 -1.0 N.D. N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -0.1 -0.9 N.D. N.D.
growth on ricinoleic acid YNB Glucose N.D. -0.3 -0.4 N.D. N.D.
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.3 -0.3 N.D. N.D.
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -0.1 -0.4 N.D. N.D.
growth on oleic acid YNB Oleic Acid N.D. -0.1 -0.4 N.D. N.D.
ypd buoyancy 40 hrs Median Buoyancy N.D. -0.3 -0.0 N.D. N.D.
growth on ypd YPD N.D. +0.0 -0.4 N.D. N.D.
facs on lipid accumulation Sorted High BODIPY Gate N.D. -0.4 +0.1 N.D. N.D.
auxotrophy Dropout Complete N.D. +0.3 -0.5 N.D. N.D.
growth on oleic acid YNB Glucose N.D. -0.1 -0.0 N.D. N.D.
auxotrophy YNB Glucose 75mM Methionine N.D. +0.5 -0.6 N.D. N.D.
ypd buoyancy 40 hrs High Buoyancy N.D. -0.1 +0.1 N.D. N.D.
auxotrophy YNB Glucose N.D. +0.1 +0.0 N.D. N.D.
auxotrophy YNB Glucose 75mM Arginine N.D. +0.4 -0.2 N.D. N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. +0.2 +0.0 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. +0.1 +0.2 N.D. N.D.
facs on lipid accumulation Sorted No BODIPY Gate N.D. +0.2 +0.1 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.0 +0.2 N.D. N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. +0.3 +0.2 N.D. N.D.
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