Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 9107 and 9108 are separated by 230 nucleotides9108 and 9109 are separated by 153 nucleotides9109 and 9110 are separated by 183 nucleotides9110 and 9111 are separated by 385 nucleotides mRNA_739: 9107 - K07359 CAMKK calcium/calmodulin-dependent protein kinase kinase, at 1,762,506 to 1,766,867 9107 mRNA_740: 9108 - K13103 TFIP11 tuftelin-interacting protein 11, at 1,767,098 to 1,770,950 9108 mRNA_741: 9109 - K12858 DDX23, PRP28 ATP-dependent RNA helicase DDX23/PRP28, at 1,771,104 to 1,774,231 9109 mRNA_742: 9110 - HMMPfam-SPT2 chromatin protein-PF08243,SMART-SPT2 chromatin protein-SM00784, at 1,774,415 to 1,775,869 9110 mRNA_743: 9111 - K08493 VTI1 vesicle transport through interaction with t-SNAREs 1, at 1,776,255 to 1,777,416 9111
Group Condition mRNA_739 mRNA_740 mRNA_741 mRNA_742 mRNA_743
9107 9108 9109 9110 9111
ypd buoyancy 40 hrs No Buoyancy Separation -1.0 N.D. N.D. +0.4 -2.6
auxotrophy YNB Glucose 75mM Methionine -0.6 N.D. N.D. -0.2 -1.2
facs on lipid accumulation Sorted High BODIPY Gate +0.1 N.D. N.D. +0.0 -1.4
auxotrophy Dropout Complete -0.5 N.D. N.D. -0.1 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.4 N.D. N.D. -0.2 -0.2
facs on lipid accumulation Sorted No BODIPY Gate +0.1 N.D. N.D. -0.2 -0.5
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 N.D. N.D. -0.3 -0.4
auxotrophy YNB Glucose 75mM Arginine -0.2 N.D. N.D. +0.0 -0.4
growth on ricinoleic acid YNB Glucose -0.4 N.D. N.D. +0.3 -0.4
auxotrophy YNB Glucose +0.0 N.D. N.D. -0.0 -0.3
growth on ricinoleic acid YNB Ricinoleic Acid -1.5 N.D. N.D. -0.1 +1.5
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 N.D. N.D. +0.2 -0.6
ypd buoyancy 40 hrs Low Buoyancy -0.3 N.D. N.D. -0.0 +0.3
ypd buoyancy 40 hrs Median Buoyancy -0.0 N.D. N.D. -0.1 +0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.0 N.D. N.D. -0.1 +0.3
growth on ricinoleic acid YNB Methylricinoleic Acid -0.9 N.D. N.D. -0.3 +1.5
growth on oleic acid YNB Glucose -0.0 N.D. N.D. +0.3 +0.1
ypd buoyancy 40 hrs High Buoyancy +0.1 N.D. N.D. +0.5 -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.2 N.D. N.D. +0.3 -0.1
growth on ypd YPD -0.4 N.D. N.D. +0.0 +0.8
growth on oleic acid YNB Oleic Acid -0.4 N.D. N.D. +0.2 +1.2
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