Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 9109 and 9110 are separated by 183 nucleotides9110 and 9111 are separated by 385 nucleotides9111 and 9112 are separated by 500 nucleotides9112 and 9113 are separated by 197 nucleotides mRNA_741: 9109 - K12858 DDX23, PRP28 ATP-dependent RNA helicase DDX23/PRP28, at 1,771,104 to 1,774,231 9109 mRNA_742: 9110 - HMMPfam-SPT2 chromatin protein-PF08243,SMART-SPT2 chromatin protein-SM00784, at 1,774,415 to 1,775,869 9110 mRNA_743: 9111 - K08493 VTI1 vesicle transport through interaction with t-SNAREs 1, at 1,776,255 to 1,777,416 9111 mRNA_744: 9112 - KOG2533 Permease of the major facilitator superfamily, at 1,777,917 to 1,780,253 9112 mRNA_745: 9113 - K00101 E1.1.2.3, lldD L-lactate dehydrogenase (cytochrome), at 1,780,451 to 1,782,779 9113
Group Condition mRNA_741 mRNA_742 mRNA_743 mRNA_744 mRNA_745
9109 9110 9111 9112 9113
ypd buoyancy 40 hrs No Buoyancy Separation N.D. +0.4 -2.6 -0.2 -0.3
facs on lipid accumulation Sorted High BODIPY Gate N.D. +0.0 -1.4 -0.3 -0.1
auxotrophy YNB Glucose 75mM Methionine N.D. -0.2 -1.2 -0.2 +0.1
auxotrophy Dropout Complete N.D. -0.1 -0.2 -0.8 -0.2
auxotrophy YNB Glucose 75mM Arginine N.D. +0.0 -0.4 -0.6 +0.1
auxotrophy YNB Glucose N.D. -0.0 -0.3 -0.4 +0.4
facs on lipid accumulation Sorted No BODIPY Gate N.D. -0.2 -0.5 +0.4 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. -0.3 -0.4 +0.2 +0.3
growth on oleic acid YNB Glucose N.D. +0.3 +0.1 -0.7 +0.2
ypd buoyancy 40 hrs High Buoyancy N.D. +0.5 -0.2 -0.6 +0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. +0.2 -0.6 -0.0 +0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. -0.1 +0.3 -0.4 +0.2
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -0.2 -0.2 +0.3 +0.2
growth on ricinoleic acid YNB Glucose N.D. +0.3 -0.4 -0.0 +0.3
ypd buoyancy 40 hrs Median Buoyancy N.D. -0.1 +0.2 -0.0 +0.1
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.0 +0.3 -0.0 -0.0
growth on ypd YPD N.D. +0.0 +0.8 -0.3 +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.3 -0.1 +0.3 +0.4
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -0.3 +1.5 -0.3 +0.4
growth on oleic acid YNB Oleic Acid N.D. +0.2 +1.2 +0.0 +0.0
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -0.1 +1.5 -0.0 +0.4
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