Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 9111 and 9112 are separated by 500 nucleotides9112 and 9113 are separated by 197 nucleotides9113 and 9114 are separated by 332 nucleotides9114 and 9115 are separated by 158 nucleotides mRNA_743: 9111 - K08493 VTI1 vesicle transport through interaction with t-SNAREs 1, at 1,776,255 to 1,777,416 9111 mRNA_744: 9112 - KOG2533 Permease of the major facilitator superfamily, at 1,777,917 to 1,780,253 9112 mRNA_745: 9113 - K00101 E1.1.2.3, lldD L-lactate dehydrogenase (cytochrome), at 1,780,451 to 1,782,779 9113 mRNA_746: 9114 - KOG0143 Iron/ascorbate family oxidoreductases, at 1,783,112 to 1,784,758 9114 mRNA_747: 9115 - K02737 PSMB5 20S proteasome subunit beta 5, at 1,784,917 to 1,786,577 9115
Group Condition mRNA_743 mRNA_744 mRNA_745 mRNA_746 mRNA_747
9111 9112 9113 9114 9115
ypd buoyancy 40 hrs No Buoyancy Separation -2.6 -0.2 -0.3 -0.0 N.D.
facs on lipid accumulation Sorted High BODIPY Gate -1.4 -0.3 -0.1 -0.5 N.D.
auxotrophy YNB Glucose 75mM Methionine -1.2 -0.2 +0.1 +0.0 N.D.
auxotrophy Dropout Complete -0.2 -0.8 -0.2 +0.2 N.D.
auxotrophy YNB Glucose 75mM Arginine -0.4 -0.6 +0.1 +0.3 N.D.
ypd buoyancy 40 hrs High Buoyancy -0.2 -0.6 +0.3 +0.2 N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.5 +0.4 -0.1 -0.1 N.D.
growth on ricinoleic acid YNB Glucose -0.4 -0.0 +0.3 -0.1 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 +0.3 +0.2 -0.5 N.D.
auxotrophy YNB Glucose -0.3 -0.4 +0.4 +0.3 N.D.
growth on oleic acid YNB Glucose +0.1 -0.7 +0.2 +0.3 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.6 -0.0 +0.4 +0.6 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.4 +0.2 +0.3 +0.4 N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.2 -0.0 +0.1 +0.2 N.D.
ypd buoyancy 40 hrs Low Buoyancy +0.3 -0.0 -0.0 +0.2 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.3 -0.4 +0.2 +0.4 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 +0.3 +0.4 +0.3 N.D.
growth on ypd YPD +0.8 -0.3 +0.2 +0.6 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +1.5 -0.0 +0.4 -0.3 N.D.
growth on oleic acid YNB Oleic Acid +1.2 +0.0 +0.0 +0.3 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid +1.5 -0.3 +0.4 -0.1 N.D.
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