Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 9112 and 9113 are separated by 197 nucleotides9113 and 9114 are separated by 332 nucleotides9114 and 9115 are separated by 158 nucleotides9115 and 9116 are separated by 948 nucleotides mRNA_744: 9112 - KOG2533 Permease of the major facilitator superfamily, at 1,777,917 to 1,780,253 9112 mRNA_745: 9113 - K00101 E1.1.2.3, lldD L-lactate dehydrogenase (cytochrome), at 1,780,451 to 1,782,779 9113 mRNA_746: 9114 - KOG0143 Iron/ascorbate family oxidoreductases, at 1,783,112 to 1,784,758 9114 mRNA_747: 9115 - K02737 PSMB5 20S proteasome subunit beta 5, at 1,784,917 to 1,786,577 9115 mRNA_748: 9116 - Hypothetical Protein, at 1,787,526 to 1,789,386 9116
Group Condition mRNA_744 mRNA_745 mRNA_746 mRNA_747 mRNA_748
9112 9113 9114 9115 9116
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 -0.3 -0.0 N.D. -0.6
facs on lipid accumulation Sorted High BODIPY Gate -0.3 -0.1 -0.5 N.D. -0.1
facs on lipid accumulation Sorted Low BODIPY Gate +0.3 +0.2 -0.5 N.D. -0.6
ypd buoyancy 40 hrs High Buoyancy -0.6 +0.3 +0.2 N.D. -0.1
auxotrophy Dropout Complete -0.8 -0.2 +0.2 N.D. +0.6
facs on lipid accumulation Sorted No BODIPY Gate +0.4 -0.1 -0.1 N.D. -0.2
ypd buoyancy 40 hrs Low Buoyancy -0.0 -0.0 +0.2 N.D. -0.0
ypd buoyancy 40 hrs Median Buoyancy -0.0 +0.1 +0.2 N.D. -0.1
growth on oleic acid YNB Glucose -0.7 +0.2 +0.3 N.D. +0.4
auxotrophy YNB Glucose 75mM Methionine -0.2 +0.1 +0.0 N.D. +0.6
auxotrophy YNB Glucose 75mM Arginine -0.6 +0.1 +0.3 N.D. +0.8
growth on ypd YPD -0.3 +0.2 +0.6 N.D. +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 +0.4 -0.1 N.D. +0.6
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.4 +0.2 +0.4 N.D. +0.4
growth on oleic acid YNB Oleic Acid +0.0 +0.0 +0.3 N.D. +0.4
auxotrophy YNB Glucose -0.4 +0.4 +0.3 N.D. +0.5
growth on ricinoleic acid YNB Glucose -0.0 +0.3 -0.1 N.D. +0.7
growth on ricinoleic acid YNB Ricinoleic Acid -0.0 +0.4 -0.3 N.D. +0.8
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 +0.3 +0.4 N.D. +0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.3 +0.4 +0.3 N.D. +0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 +0.4 +0.6 N.D. +0.4
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