Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 9113 and 9114 are separated by 332 nucleotides9114 and 9115 are separated by 158 nucleotides9115 and 9116 are separated by 948 nucleotides9116 and 9117 are separated by 322 nucleotides mRNA_745: 9113 - K00101 E1.1.2.3, lldD L-lactate dehydrogenase (cytochrome), at 1,780,451 to 1,782,779 9113 mRNA_746: 9114 - KOG0143 Iron/ascorbate family oxidoreductases, at 1,783,112 to 1,784,758 9114 mRNA_747: 9115 - K02737 PSMB5 20S proteasome subunit beta 5, at 1,784,917 to 1,786,577 9115 mRNA_748: 9116 - Hypothetical Protein, at 1,787,526 to 1,789,386 9116 mRNA_749: 9117 - Hypothetical Protein, at 1,789,709 to 1,790,560 9117
Group Condition mRNA_745 mRNA_746 mRNA_747 mRNA_748 mRNA_749
9113 9114 9115 9116 9117
ypd buoyancy 40 hrs No Buoyancy Separation -0.3 -0.0 N.D. -0.6 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate +0.2 -0.5 N.D. -0.6 N.D.
facs on lipid accumulation Sorted High BODIPY Gate -0.1 -0.5 N.D. -0.1 N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.1 -0.1 N.D. -0.2 N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.0 +0.2 N.D. -0.0 N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.1 +0.2 N.D. -0.1 N.D.
ypd buoyancy 40 hrs High Buoyancy +0.3 +0.2 N.D. -0.1 N.D.
auxotrophy Dropout Complete -0.2 +0.2 N.D. +0.6 N.D.
growth on oleic acid YNB Oleic Acid +0.0 +0.3 N.D. +0.4 N.D.
auxotrophy YNB Glucose 75mM Methionine +0.1 +0.0 N.D. +0.6 N.D.
growth on ypd YPD +0.2 +0.6 N.D. +0.1 N.D.
growth on ricinoleic acid YNB Glucose +0.3 -0.1 N.D. +0.7 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid +0.4 -0.1 N.D. +0.6 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +0.4 -0.3 N.D. +0.8 N.D.
growth on oleic acid YNB Glucose +0.2 +0.3 N.D. +0.4 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.2 +0.4 N.D. +0.4 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.3 +0.4 N.D. +0.3 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.4 +0.3 N.D. +0.3 N.D.
auxotrophy YNB Glucose 75mM Arginine +0.1 +0.3 N.D. +0.8 N.D.
auxotrophy YNB Glucose +0.4 +0.3 N.D. +0.5 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.4 +0.6 N.D. +0.4 N.D.
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